| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2809 |
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| Symbol | |
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| ID | 6161850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3094303 |
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| End bp | 3095640 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665587 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001791839 |
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| Protein GI | 171059490 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTC TGTTTGGACG TTTGCTGAGC GCCATCTTTG CCTTGACCGT CGGCGGTCTG
ATCGGCTGGC TGGCGGGACG CGTGTTTGCC GCACCCTGGT GGGGTGCCTG GGGCGGCGCC
TGCATCGGGC TGCTGCTGGT CAACCTGCGC GACGCGCTGC GCAGCCAGGC GCTGGTGAAC
TGGCTGCGCG GTACACAAGA GGGCGGTGCC CCGCGCGGCG GACAGATGTG GGGCGAACTG
GCCTACCGCA TCGAACGCGC GCTGCAGCAG CGCGAACGGG CGCTCGTGAC CGAGCGGCAG
CGGCTGGCCC AGTTCCTCCT GGCCATCGAG GTCTCGCCCA ACGGCGTGCT GCTGCTCGAC
GCCGACGAGC AGATCAGCTG GTGCAACTCG GTGGCTGCCG ATCACTTCGG CCTCAACCCC
GTGCGCGACC TCGGTCAGCG CATCACCAAC CTCGTGCGCG CTCCGGCGTT CGTCGCCTAT
CTGCAGGCTG GCGACTACGA CGAGGCCGTT CCGGTGATCA ACCACGGGCG TGACCTGACG
CTGTCGGTGC TGGTCCGCCC CTACGGCGAG GGCTTGCGGC TGATCCTGTC CAACGACGTC
ACCGAGCGCC TGCGCTCGGA AGGCATGCGC CGGGATTTCG TGGCCAACGT GTCGCACGAG
ATCCGCACGC CGTTGACGGT GCTGGGTGGC TTCGTCGAAA CCATGAGCAA CCTGCCGCTC
ACGGAGCCGG AACGAAAGCG CGTGCTCACA CTGATGACGC TCCAGACGCA GCGCATGCAG
ACGCTGGTGG CTGACCTGCT GATCCTGGCC CAGCTCGAAG GCAGTCCGCG GCCGGCGGTC
GATCAGTGGG TTTCGGTGCG CGGCCTGTTC GCGCAGGTCG AAACCGAGAT CGTGGCCTTG
TCCAAGGGGC GGCATCTGCT CGGGTTCAAG TCCGAGGGGT GCCCTGACGT GCTGGCCGAA
GACGGCGCCG ACTGCCTGCT GGCCGGCAGC GAGACCGAGT TGCTGTCGGC CTTCACCAAC
CTGTGCAGCA ACGCGGTCCG CTACACGCCC GAAGGCGGGC GCATCGACGT GCGGTGGTTG
CGTCGCCCGG GGGGCGATGG CGTGTTCGAG GTGCGCGACA ACGGCCTGGG CATCGCCCGG
GAACATCTGC CGCGCCTGAC CGAGCGTTTC TACCGCGTCG ACGGCAGCCG CTCACGCGAA
ACCGGTGGCA CCGGGCTCGG CCTGTCGATC GTCAAGCATG TGATGCAGCG TCATGGCGGC
CAGCTCGAGG TCGAGAGCGA ACCCGGGCGG GGTTCGTGTT TCCGGCTCGT TTTCCCGGCC
GCCCGGGTGC GCGTCTGA
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| Protein sequence | MNFLFGRLLS AIFALTVGGL IGWLAGRVFA APWWGAWGGA CIGLLLVNLR DALRSQALVN
WLRGTQEGGA PRGGQMWGEL AYRIERALQQ RERALVTERQ RLAQFLLAIE VSPNGVLLLD
ADEQISWCNS VAADHFGLNP VRDLGQRITN LVRAPAFVAY LQAGDYDEAV PVINHGRDLT
LSVLVRPYGE GLRLILSNDV TERLRSEGMR RDFVANVSHE IRTPLTVLGG FVETMSNLPL
TEPERKRVLT LMTLQTQRMQ TLVADLLILA QLEGSPRPAV DQWVSVRGLF AQVETEIVAL
SKGRHLLGFK SEGCPDVLAE DGADCLLAGS ETELLSAFTN LCSNAVRYTP EGGRIDVRWL
RRPGGDGVFE VRDNGLGIAR EHLPRLTERF YRVDGSRSRE TGGTGLGLSI VKHVMQRHGG
QLEVESEPGR GSCFRLVFPA ARVRV
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