| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2806 |
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| Symbol | rho |
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| ID | 6161920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3090832 |
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| End bp | 3092094 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641665584 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001791836 |
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| Protein GI | 171059487 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTTT CCGAACTCAA GGCCCAACAC ATCTCGGCGC TGGTCCAGAT GGCCGAGACG
CTTGAGATCG AAAACGCCAG CCGCCTGCGC AAGCAGGAGT TGATGTTTGC GATCATGAAA
AAGCGCGCCC GGCAAGGCGA ACAAATCTTC GGCGACGGCG TGCTGGAAGT GCTGCCGGAC
GGCTTCGGTT TCCTGCGCTC CCTCGACGCG AGTTTCCTGG CCAGCACCGA CGACATCTAC
CTGTCGCCGA GCCAGATCCG ACGTTTCAAC CTGCACACCG GCGACATGAT CGAAGGTGAA
GTGCGGGTAC CCAAGGACGG CGAACGCTAC TTCGCGCTGG TGAAAGTTGA CCGAGTCAAC
GAACTGACGC CGGAGGAGAG CAAGAACAAG ATCATGTTCG AGAACCTCAC GCCGCTGTTC
CCCAAGGAGC AGTTCCGGCT TGAGCGCGAC GTCAAGAACG AAGAAAACAT CACCAGCCGC
ATCATCGACC TGATCGCGCC GATCGGCAAA GGTCAGCGAG CGCTGCTGGT GGCGCCGCCC
AAGAGCGGCA AGACGGTCAT GATGCAGCAC TTCGCACATG CCCTGATCGC CAACCATCCC
GACGTGCACC TGATCGTGCT GCTGGTCGAC GAGCGGCCCG AAGAAGTGAC CGAGATGCAG
CGCACCGTGC GCGGCGAGGT CATCAGTTCG ACCTTCGACG AACCCGCCGC ACGCCACGTG
CAGGTGGCTG AAATGGTGAT CGAACGCGCC AAGCGGCTGG TCGAACTGCG CAAGGATGTC
GTCATCCTGC TCGACTCGAT CACCCGACTG GCCCGTGCCT ACAACAACGT GCTGCCCTCG
TCGGGCAAGG TTCTGACCGG CGGCGTCGAC GCCGGCGCGC TTCAGCGTCC GAAGCGCTTC
TTCGGCGCGG CCCGCAATGT CGAGGAAGGC GGTTCGCTGA CCATCATCGG CACCGCCCTG
ATCGACACCG GCAGCCGCAT GGACGAGGTG ATCTACGAAG AGTTCAAGGG CACCGGCAAC
TGCGAGATCC ACCTGGATCG GCGCATGGCC GAGAAGCGTG TCTACCCGTC GATCCTGCTC
AACAAGTCGG GCACCCGTCG CGAGGAACTG CTGCTCAAGC CGGAGATCCT GCAGAAGACC
TGGATCCTGC GCAAGCTGCT CTATCCGATG GACGAGATCG AGGCGATGGA GTTCATCCTC
GACAAGATGA AGGCCACCAA GAGCAACATC GACTTCTTCG ACCTGATGCG CCGTGGTGGC
TGA
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| Protein sequence | MHLSELKAQH ISALVQMAET LEIENASRLR KQELMFAIMK KRARQGEQIF GDGVLEVLPD
GFGFLRSLDA SFLASTDDIY LSPSQIRRFN LHTGDMIEGE VRVPKDGERY FALVKVDRVN
ELTPEESKNK IMFENLTPLF PKEQFRLERD VKNEENITSR IIDLIAPIGK GQRALLVAPP
KSGKTVMMQH FAHALIANHP DVHLIVLLVD ERPEEVTEMQ RTVRGEVISS TFDEPAARHV
QVAEMVIERA KRLVELRKDV VILLDSITRL ARAYNNVLPS SGKVLTGGVD AGALQRPKRF
FGAARNVEEG GSLTIIGTAL IDTGSRMDEV IYEEFKGTGN CEIHLDRRMA EKRVYPSILL
NKSGTRREEL LLKPEILQKT WILRKLLYPM DEIEAMEFIL DKMKATKSNI DFFDLMRRGG
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