Gene Lcho_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2797 
Symbol 
ID6161923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3081369 
End bp3082778 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content71% 
IMG OID641665575 
Productbifunctional enoyl-CoA hydratase/phosphate acetyltransferase 
Protein accessionYP_001791827 
Protein GI171059478 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG0280] Phosphotransacetylase
[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00022761 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATCG ATCTCAACGA CGCGTGGCTG GTCAACACCA CCTTCGATGA ACTCACCGTC 
GGTCAGGGCG CCACGATGCG CCGCTCGCTG ACCGATGCCG ACATCGCCGG CTTCGCCGCG
ATCTCGGGCG ATCTCAACCC GACCCACCTC GACGAGGCCT ACGCGCAGGG CGAAGGCATG
GCCGGCCGCA CCGCGCACGG CATGTGGAGC GGCGCGCTGG TGTCCACCGT GCTGGGCACG
GTCTTCCCCG GCCCGGGCAC GCGCTATGTC GAGCAGCGCC TGCGCTTTCT CGGCGAGGCG
CGGGTCGGTG ACCTGCTCGA CGTCTCGGTG CGCGTGACGT CCAAGGATCC GGCCACCTTC
TTCGTCACGC TCGACTGCGC GGTGCGCCGC CAGGACGGCC GCGAGCTGAT GGCCGGCGAG
GCCGTGGTGA TGGCGCCGAT GCACAAGCAG CGCGTGCGCA GCGCCAACGG CCTGCGCTGG
CATGTGTTCG ACGCCGCCGC CGGCGTGCGC GGCCTGATCG CCAAGGCGAC CCAGCTCGGC
CGCCTGAACT GCGCCATCGT GCACCCGTGC GACACCGAAT CGCTGCGCGG CGCGCTCGAT
GCGGCGCATC ACGGCCTGTT CACGCCCGTC ATCGTGGCGC CGCGCGAGCG CATCCTGGCG
ATCGCCGGCC AGGCCGGCCT CGACCTCGGC TCGGCCGTGA TCGAGGACGT GCCGCACAGC
CACGCCGCCG CCGAACGCGC CGCCGCCCTG GCCGCGACCG GCGAAGTGCA GGCGCTGATG
AAGGGCAGCC TGCACACCGA CGAGCTGATG AAGGCGGTGC TGTCGCGCCC CGAACTGCGC
ACCAAGCGGC GCCTGTCGCA CGTGTTCCGC TTCGACGCGC CGGCGTATCA CAAGCCGCTG
CTCGTGACCG ACGCGGCGAT GAACATCGCC CCCACGCTCG ACGAGAAGGT CCACATCGTG
CAGAACGCGA TCGACCTGGC GCGCATCCTG GGTGTCGAGA CACCCAAGGC GGCGATCCTC
GCCGCGGTCG AGAGCGTCAA CTCGAAGATG GCCTGCACGC TCGACGCCGC CGCGCTGAGC
AAGATGGCCG ACCGCGGCCA GATCACCGGC GGCATCGTCG ACGGGCCGCT GGCCTTCGAC
AACGCCATCT CGGCCGAGGC CGCGCGCACC AAGGGCATCG TCTCGCCGGT GGCCGGCGAC
CCGGACATCC TGGTGGTGCC CGACCTGGTG TCCGGCAACA TCCTGGCCAA GCAGCTCGAA
TACCTCGGCG GCGCGATGGG CAGCGGCGTG GTGCTCGGCG CCCGGGTGCC GATCGCGCTG
ACCAGCCGCG CCGACGGCGC CACCGCCCGC CTGGCCTCGG CCGCGCTGGC GGTGCTGGTG
GCCCACAGCT ACAAGGCAGC ACAACCATGA
 
Protein sequence
MNIDLNDAWL VNTTFDELTV GQGATMRRSL TDADIAGFAA ISGDLNPTHL DEAYAQGEGM 
AGRTAHGMWS GALVSTVLGT VFPGPGTRYV EQRLRFLGEA RVGDLLDVSV RVTSKDPATF
FVTLDCAVRR QDGRELMAGE AVVMAPMHKQ RVRSANGLRW HVFDAAAGVR GLIAKATQLG
RLNCAIVHPC DTESLRGALD AAHHGLFTPV IVAPRERILA IAGQAGLDLG SAVIEDVPHS
HAAAERAAAL AATGEVQALM KGSLHTDELM KAVLSRPELR TKRRLSHVFR FDAPAYHKPL
LVTDAAMNIA PTLDEKVHIV QNAIDLARIL GVETPKAAIL AAVESVNSKM ACTLDAAALS
KMADRGQITG GIVDGPLAFD NAISAEAART KGIVSPVAGD PDILVVPDLV SGNILAKQLE
YLGGAMGSGV VLGARVPIAL TSRADGATAR LASAALAVLV AHSYKAAQP