| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2790 |
|---|
| Symbol | |
|---|
| ID | 6162196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3072945 |
|---|
| End bp | 3073268 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641665567 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001791820 |
|---|
| Protein GI | 171059471 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1146] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00029176 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG TCGTCACCGA ATCGTGCATC CGCTGCAAGT ACACCGACTG TGTCGATGTG
TGCCCGGTCG ATTGCTTCCG CGAAGGCCCC AACTTCCTGG TCATCGACCC GGATGAATGC
ATCGATTGCG CGGTCTGCAT CCCCGAATGC CCGGTCAACG CCATCCTGCC CGAGGAAGAC
GTGCCGGCCG ATCAGATGAA GTTCATCGCC ATCAACGCCG AGCTGTCGCC CAAGTGGCCG
AGCATCACCA AGCGCAAGGC AGCGCTGCCC GATGCCGACG AATGGAAAGA CCGCAAGGAC
AAGCTCGGCG AGCTCAAGCG CTGA
|
|---|
| Protein sequence | MTHVVTESCI RCKYTDCVDV CPVDCFREGP NFLVIDPDEC IDCAVCIPEC PVNAILPEED
VPADQMKFIA INAELSPKWP SITKRKAALP DADEWKDRKD KLGELKR
|
|---|
| |