| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2785 |
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| Symbol | |
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| ID | 6162249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3068404 |
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| End bp | 3068940 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665562 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791815 |
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| Protein GI | 171059466 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3749] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000338727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTCA TCGACACCCA TCGCGACGCC TGGCACACCG CCCTCGGCGA AGACGGCCCG
ACGCCGCACC CGATCGCCCG TGAAGGCCTG CTGCTCACGC TCGAACAATG GCACGCCGTG
CGCGACACCT GGCCCGCGGG CCTGCGCACC GGGCTGATGC TGGGCAACAA CGCCGACGTC
GAAGACATCG CCGACGACCT GCCGCGCCTG GCGCTGATCG TGCTGAACTT CCCCAAGTGG
GTCGACGGCC GCGCCTACAG CCAGGCCCGC CTGCTGCGCT CGCGTTACCG CTACACCGGC
GAAGTGCGCG CCACCGGCGA GGTGCTGGTC GACATGATGC AGCTGCTGCA TCGCACCGGC
TTCGACGCCG TGGTGCTGCG CCATGACCAG TCGGTCGAGG TGGCCGAGCG GGCTTTGAGC
TTCTTCGCCG GCCACTACCA GGGCGACGTG GGCGAGACCC GCCCGGTGTT CGTGCGCCCG
GCCAGCGAGG CCTGGACGCC ACGCGACGAA TTCCTGAACG AAGGGGCTTC GATATGA
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| Protein sequence | MKFIDTHRDA WHTALGEDGP TPHPIAREGL LLTLEQWHAV RDTWPAGLRT GLMLGNNADV
EDIADDLPRL ALIVLNFPKW VDGRAYSQAR LLRSRYRYTG EVRATGEVLV DMMQLLHRTG
FDAVVLRHDQ SVEVAERALS FFAGHYQGDV GETRPVFVRP ASEAWTPRDE FLNEGASI
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