Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2782 |
Symbol | |
ID | 6162273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3065147 |
End bp | 3065680 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665559 |
Product | hypothetical protein |
Protein accession | YP_001791812 |
Protein GI | 171059463 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000264775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCAAA TCAAGAATGA CATCCTGACC ATCAAGGACA ACCCGACCTG TCGTGGCCAC GCGACGGCGG CGGCGCGGAT CCTTCGGCGG GTGGGGGCCG GCATCCTCGC GCTGCTGCTG AGCGCAGGCG CGGTGACGGC AGGCGCCCAG GAAAGCGCAC AGAAGCTCGA GACGATCCGC CTCAACGCCG GCATGCACCT GATCACCGCC GAGGTGGCAC AGACCCCCGC GCAGCGCCAG ATCGGCCTGA TGCACCGCCC GAGCATGCCG GCCAACGACG GCATGCTGTT CGTCTTCGAG GAGCGTGGCA TGCACTGCTT CTGGATGAAG AACACGCTGC TGCCGCTGGC GATCGCCTTC ATCGCCGACG ACGGCCGCAT CGTCAACATC GCCGAGATGC AGGCCGGCAG CGAGGCCTCG CACTGCCCGC GCCAGCCGGT GCGCTACGCA CTGGAGATGA ACCAGGGCTG GTTCGCCAAA CGCGGTTTCA AGGCCGGCGC CCGGATCGAC GGCGGCCCGT TTCCGGTTCG TTGA
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Protein sequence | MIQIKNDILT IKDNPTCRGH ATAAARILRR VGAGILALLL SAGAVTAGAQ ESAQKLETIR LNAGMHLITA EVAQTPAQRQ IGLMHRPSMP ANDGMLFVFE ERGMHCFWMK NTLLPLAIAF IADDGRIVNI AEMQAGSEAS HCPRQPVRYA LEMNQGWFAK RGFKAGARID GGPFPVR
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