| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2780 |
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| Symbol | |
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| ID | 6162271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3062478 |
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| End bp | 3062648 |
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| Gene Length | 171 bp |
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| Protein Length | 56 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641665557 |
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| Product | cytochrome oxidase maturation protein, cbb3-type |
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| Protein accession | YP_001791810 |
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| Protein GI | 171059461 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
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| TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000173065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGACATCC TTTTCCTGCT CGTCCCTCTG TCGGTGGTGC TGGTCTTCGC GATCCTGGCC
GTGTTTGCCT GGGCCCTGAA GTCGGGCCAG TTTGACGACA TGGAGCGACA GGGCGAGCGC
CTGTTGCGCG ACGAGCCTGC CGAGGTTGAT ACCGATCAAG CAGGTCGGTA A
|
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| Protein sequence | MDILFLLVPL SVVLVFAILA VFAWALKSGQ FDDMERQGER LLRDEPAEVD TDQAGR
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