| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2779 |
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| Symbol | |
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| ID | 6162270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3060983 |
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| End bp | 3062422 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641665556 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001791809 |
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| Protein GI | 171059460 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000451969 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTTGA ATTCACAGAC GGCTCGCCCC GTCTACACCG ATGCCGTGGT CAGGCAATTT
GCCCTGGCCG CGGTGTTATG GGGCGTGGTG GGCATGCTGG TCGGCGTGAT CGTCGCCTCC
CAGCTGGCCT GGCCCGAACT CAACTTCGGC ATTTCCTGGC TCAGTTACGG TCGACTTCGA
CCGCTGCACA CCAATGCGGT GATCTTCGCC TTCGGCGGCT GCGTGCTGTT TGCCACCAGC
TACCACGTGG TGCAGCGCAC CTGCCAGACC CGGCTGTTCC TGCCGGCGCT GGCCCAGTTC
ACCTTCTGGG GCTGGCAGCT GGTGATCCTG GCTGCGGCCG TCTCGCTGCC GCTGGGCTAC
ACCCAGGGCA AGGAATACGC CGAACTCGAA TGGCCGATCG ACCTGCTGAT CGCCGTCGTC
TGGGTTTCGT ACGCCATCGT GTTCTTCGGC ACGGTGGGCA TCCGCAAGGT GCGCCACATC
TACGTGGCGA ACTGGTTCTT CGGCGCCTTC ATCCTCGCCG TGGCGCTGCT GCACATCGTC
AACAGCGCGG CCATCCCGGT CAGCCTGACC AAGTCCTACT CGGCCTACGC CGGCGTGCAG
GACGCGATGG TGCAGTGGTG GTACGGCCAC AACGCGGTGG GCTTCTTCCT GACCGCGGGC
TTCCTGGGGA TCATGTACTA CTACATCCCC AAGCAGGCCG AGCGCCCGGT GTATTCGTAT
CGCCTGTCGA TCGTGCACTT CTGGGCCCTG ATCTTCACCT ACATGTGGGC CGGCCCGCAC
CACCTGCACT ACACCGCGCT GCCCGACTGG GCGCAGAGCG TGGGCATGGT GTTCTCGCTG
GTGCTGCTGG CGCCGAGCTG GGGCGGCATG ATCAACGGCA TCATGACCCT GTCGGGTGCC
TGGCACAAAC TGCGTGACGA CCCGATCCTG AAGTTCCTGA TCGTCTCGCT GTCGTTCTAC
GGCATGTCGA CCTTCGAAGG TCCGATGATG TCGATCAAGA CCGTCAACGC ACTGTCCCAC
TACACCGACT GGACCGTCGG CCACGTGCAC TCGGGTGCGC TGGGCTGGGT CGGCCTGGTG
TCGATGGGCG CGCTGTACTA CCTGATCCCG CGCATGTTCG GTCGCAAGGC CATGTACAGC
GTGCGTGCCA TCGAGCTGCA CTTCTGGGTG GCGACCATCG GCATCGTGCT CTACATCGCC
GCGATGTGGA TTGCCGGCGT GATGCAGGGC CTGATGTGGC GCGCGGTCAA CCCCGACGGC
ACGCTGGTCT ACAGCTTCGT CGAGAGCGTC AAGGCGACCT ATCCGTTCTA CGTGATCCGC
GTCGCCGGTG GTCTGCTCTA TCTGGGCGGC ATGATCATCA TGGCCTGGAA CACCGTGATG
ACGGTGCGCA ACGGCCGCGC CGAAGCCGCA CCGATCCCGC TCGTGGCGGC CCACGCCTGA
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| Protein sequence | MALNSQTARP VYTDAVVRQF ALAAVLWGVV GMLVGVIVAS QLAWPELNFG ISWLSYGRLR
PLHTNAVIFA FGGCVLFATS YHVVQRTCQT RLFLPALAQF TFWGWQLVIL AAAVSLPLGY
TQGKEYAELE WPIDLLIAVV WVSYAIVFFG TVGIRKVRHI YVANWFFGAF ILAVALLHIV
NSAAIPVSLT KSYSAYAGVQ DAMVQWWYGH NAVGFFLTAG FLGIMYYYIP KQAERPVYSY
RLSIVHFWAL IFTYMWAGPH HLHYTALPDW AQSVGMVFSL VLLAPSWGGM INGIMTLSGA
WHKLRDDPIL KFLIVSLSFY GMSTFEGPMM SIKTVNALSH YTDWTVGHVH SGALGWVGLV
SMGALYYLIP RMFGRKAMYS VRAIELHFWV ATIGIVLYIA AMWIAGVMQG LMWRAVNPDG
TLVYSFVESV KATYPFYVIR VAGGLLYLGG MIIMAWNTVM TVRNGRAEAA PIPLVAAHA
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