| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2778 |
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| Symbol | |
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| ID | 6162269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3060332 |
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| End bp | 3060961 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641665555 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001791808 |
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| Protein GI | 171059459 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000140321 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAATG CAAACACTCC CGTTGGTGGT CACGAGAAGA TCGAGACCAG CAACTTCCTG
ATGATCGTGC TGGTGCTGCT GACCATCATC TGGGGCGGTC TCGTCGAGAT CGTGCCGCTG
TTCTTCCAGC GCTCGACCAC CCAGCCGATC GAGGGCCTGA AGCCCTATAC CGCGCTGCAG
CTGGCCGGCC GCGACGTCTA CATCCGCGAG GGTTGCTACA ACTGCCACTC GCAGATGATC
CGTCCGTTCC GCTCCGAGAC GCTGCGCTAC GGCCCCTACT CGCAGGCCGG CGAGTTCGTC
TATGACCACC CCTTCCAGTG GGGCAGCAAG CGCACCGGTC CCGACCTGCA CCGCGTGGGC
GGCAAGTACA GCGACGAATG GCATCGCATC CACCTGACCA ATCCGCGTGA CCTGGTGCCC
GAGTCGAACA TGCCGGCCTA TCCGTGGCTC GTGAATGCGG CCGTCAATCC GGCCGACATG
GCGCCCAAGA TGAATGCCTT GCGCATGGTG GGCGTGCCCT ACACCGACGA AGAAGTGGCC
AAGGCCGCCG ACGACGTCAA GGGCAAGACC GAGATGGATG CCGTGGTGGC CTATCTGCAG
GTCATGGGCA CCGCCGGCGC GGCCAAGTGA
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| Protein sequence | MANANTPVGG HEKIETSNFL MIVLVLLTII WGGLVEIVPL FFQRSTTQPI EGLKPYTALQ
LAGRDVYIRE GCYNCHSQMI RPFRSETLRY GPYSQAGEFV YDHPFQWGSK RTGPDLHRVG
GKYSDEWHRI HLTNPRDLVP ESNMPAYPWL VNAAVNPADM APKMNALRMV GVPYTDEEVA
KAADDVKGKT EMDAVVAYLQ VMGTAGAAK
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