Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2776 |
Symbol | |
ID | 6162267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3059193 |
End bp | 3060125 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641665553 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_001791806 |
Protein GI | 171059457 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000169467 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGACT TCATTTCCAG CGGCTGGTCG CTCTTCGTGG CCGGCGTGGT CGCCCTCGGC CTGGTGTTCT GCGTTGTCCT GCTGGTGATC GCCAGCAAGC GCAAGGTGAT GGCCAACGAC AACACCACCG GCCACGTCTG GGACGAAAAC CTGCAGGAAC TCAACAACCC GCTGCCGCGC TGGTGGATGG GCCTGTTCGT GATCACCGTG GTGTTCGCGG TGCTCTACCT GGCGATCTAC CCGGGTTTCG GCAGCAGCGA AGGCGCCCTC AAGTGGAGCA GCGTGGGTCA GTGGGAAAAG GAGCAGGCCA AGGCCAAGGA GGCTCTGACC CAGGTCTATG CCCAGTTCGA GAACATGCCG GTCGAGACGC TGGCTGCCAA CACGCAGGCG ATGGGCATCG GCGAGCGGCT GTTCTCCAAC AACTGTGCCG GCTGCCATGG CTCGGACGCG CGCGGCAGCA AGACCTTCCC CAACCTGACC GACGGCGACT GGCTCGGTGG TGACGGCAGT CCCGCCTACA TCGCCAAGAC CATCGCCGAA GGCCGTCAGG GCATGATGCC GCCGATGGCT GCCGCAGTGG GTGGCCCGGA GGACGTCAAG AACGTCGCCA ACTACGTGCT CAGCCTGTCG GGCAGCGCCC ACAACAGCAT TTCCGCGCAG CTGGGCAAGA GCAAGTTCGG CGCTTGCGCG GCCTGCCACG GCGCTGATGG CAAGGGAACC CAGGCACTGG GTGCCCCCAA CCTGACCGAC AAGATCTGGC TGCACGGCTG GGGCGAAGAA GCGGTCATCG CCATCATCAA CAACGGCAAG TCGAACATGA TGCCGCAGCA TGCATCGCGT CTGACGCCGG AGCAGATCAA GGTGCTGGCG GGTTATGTCT GGAGCCTGTC GCGCAAGCCG GCAGCACAGA CCGCGCTGAA CACGGTGCAA TGA
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Protein sequence | MSDFISSGWS LFVAGVVALG LVFCVVLLVI ASKRKVMAND NTTGHVWDEN LQELNNPLPR WWMGLFVITV VFAVLYLAIY PGFGSSEGAL KWSSVGQWEK EQAKAKEALT QVYAQFENMP VETLAANTQA MGIGERLFSN NCAGCHGSDA RGSKTFPNLT DGDWLGGDGS PAYIAKTIAE GRQGMMPPMA AAVGGPEDVK NVANYVLSLS GSAHNSISAQ LGKSKFGACA ACHGADGKGT QALGAPNLTD KIWLHGWGEE AVIAIINNGK SNMMPQHASR LTPEQIKVLA GYVWSLSRKP AAQTALNTVQ
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