| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2770 |
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| Symbol | |
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| ID | 6163403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3053970 |
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| End bp | 3054689 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665547 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001791800 |
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| Protein GI | 171059451 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2836] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0226559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TCGCGCTGCT CGCATCGGCC GCGTTGATGG GCCTGGCCGG CACGCCGCAT
TGCGCGGGCA TGTGTGCGGC CGGGTGCGCC ACCGTGGCCA AGCTGTGCAA GCCGCAGCAG
GCCGAACGGG CCCTGGCTGG CGTGCTGACG GGCCGTCTGA TCGGTTACGG CTTGGCCGGT
GCGGCCGTGG CGTCTGCCGC CGGTGCCCTG CGCTGGCTGG GCGACAGCGT CGCCTGGATG
CGGCCGATCT GGTCCGCGCT GCAACTGATG GTGCTGATGC TCGGCCTGTG GCTGCTGGTG
CGCGGGCGCC TGCCCACCGG CGTGCAGGCC TGGGCCGAGC AGCTGGTGCG CCGTCCGCCG
CGCGAGGGCT GGACGCGCAT GCGCATGCCC GGCGAACTCA AGGCGGCCGG TATCGGCGCG
CTCTGGCCGG CCATCCCGTG CGGCCTGCTG CACGCGGCCC TGCTGGTGGC CGCGGTGGCG
TCCGGGCCTG TCGAAGGGGC CGGCGTGATG CTGGCTTTTG CCGTCACCAG CAGCGTCGGC
CTGATCCTCG GTCCGGCCTT CTGGCTGCGC CTGATGCCCG CAGCCGTGCG CGCCCGCGCC
GGCCTCAACG AGGGCGGCAG CCTGGCCCTG CGGCTGGCCG GCGCGCTGGT CGTCGTGACG
ATGGGCTGGT CGCTCGGCCA CAGCCTGTTC GAGCCGCTGC AAGCCGCCTG GTGCGCCTGA
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| Protein sequence | MSAVALLASA ALMGLAGTPH CAGMCAAGCA TVAKLCKPQQ AERALAGVLT GRLIGYGLAG
AAVASAAGAL RWLGDSVAWM RPIWSALQLM VLMLGLWLLV RGRLPTGVQA WAEQLVRRPP
REGWTRMRMP GELKAAGIGA LWPAIPCGLL HAALLVAAVA SGPVEGAGVM LAFAVTSSVG
LILGPAFWLR LMPAAVRARA GLNEGGSLAL RLAGALVVVT MGWSLGHSLF EPLQAAWCA
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