Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2767 |
Symbol | |
ID | 6163625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3049400 |
End bp | 3051946 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641665544 |
Product | UvrD/REP helicase |
Protein accession | YP_001791797 |
Protein GI | 171059448 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.053662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCC TGCCTCCCTC GCCCCCCCTG CCCGATTCCG GCCATCCCGC CTTTGCCGAC ATCGGCTTCG ACGAGCCCGA CCGGCGGGAT GAAACACACG ACCCGCACGA GCCGCCGGCG CGGCCTGCGC TGCCCGCGGG CCTGCTCGCC AACCTCAACC CGGAGCAGTA CGCCGCCGTC ACGCTGGCGG CCGAGCCGGC GCTGATCCTG GCCGGCGCCG GCTCGGGCAA GACCCGCGTG CTGACCACCC GCATCGCCTG GCTGCTGCAG ACCGGCCAGA TCGGCCCCGG CGGCCTGATG GCGGTCACCT TCACCAACAA GGCCGCCAAG GAGATGGTGC ACCGCCTCTC GACGATGCTG CCTTACAACG TGCGCGGCAT GTGGATCGGC ACCTTCCACG GCCTGTGCAA CCGCTTCCTG CGCGCGCACT GGAAAATGGC CGGCCTGCCG CAGAGCTTCC AGATCCTCGA CTCGGGCGAC ACGCTGAGCG CGGTCAAGCG CGTCATCAAG GCCATGAAGC TCGACGAGGA ACGCTTCGTG CCCAAGCAGG TGAGCTGGTT CATCGCGTCC AGCAAGGACG ACGGCAAGCG CCCGAAAGAC CTGCCCACCG ACGACGGCCA GGCGCGCACG ATGGTCGAGA TCTACCAGGC CTACGAGGAC CAGTGCCAGC GCGAGGGCGT GGTCGATTTC GCCGAGCTGA TGCTGCGCAG CTACGAGCTG ATGCGCGACC ACCCGGAGAT CCGCGAGCAC TACCAGCGGC GCTTCCGCCA CATCCTGGTC GACGAATTTC AAGACACCAA CCGGCTGCAG TACCTGTGGC TGAAGATGTT CGCCGGCACG CCCGGCGCGC TCGCCGGGCG CGAGCCGGCG GCGGTGTTCG CGGTCGGTGA CGACGACCAG AGCATCTACG CCTTCCGTGG CGCGCAGGTC GGCAACATGA GCGACTTCGA GCGCGAGTAC CGCGTCAGGC AGGTCATCAA GCTGGAGCGC AACTACCGCT CGTTCGGCAA CATCCTCGAC TCGGCCAACG CGCTGATCGC CCACAACAGC CGCCGCCTGG GCAAGAACCT GCGCACCGAG GCCGGGCCCG GCGAGCCGGT GCGGATCTTC GAGTCGACCA GCGATTTCGC CGAGGCACAG TGGCTGCTCG AAGAACTGCA GCAACTGCAC CGCGGCGGCA TGGCGCGCAG CGAAACCGCG ATCCTCTACC GCAGCAACGC GCAGTCGCGC GTGATCGAGT CGGCGCTGTT CAACGCCGGC ATGCCCTACC GCGTCTACGG CGGCCTGCGC TTCTTCGAGC GCGCGGAGAT CAAGCACGCG CTGGCCTACC TGCGCCTGAC CGAGAACCCG AACGACGACA CCAGCTTCCT GCGTGTCGTC AACTTCCCGG CCCGCGGCAT CGGCGCACGC AGCGTCGAGC TGCTGCAGGA CGCGGCCCGC GCCAGCGGCC GCAGCCTCTA TCAAAGCGTG GGCGCACTCG GCGGCGCGGC CGGCACCAAG CTGGCGGGCT TCACCGCGCT GGTCGACCGG CTGCGTGACG CCACCCGCGG CCTGACGCTG CGCGAGATCA TCGAACGCAT GCTCGACGCC AGCGGCCTGA TCAACTTCTA CCGCACCGAG AAGGAAGGCC AGGACCGCAT CGAGAACCTG GAGGAACTCG TCAACGCGGC CGAGGCCTTC GTGACGATCG AGGGTTTCGG CAAGGACGCG GTGGCGCTGC CGGTCGACGA GACCGCGCCC GGCACCATCG CCGCGCCCCT GCCCGGCGAG CCCGAGGCGG TGGCCGCGGT CGACCTGCTG CCCGACGCCG AAACCGGCGA GATCCTGTCG CCGCTGGCGG CCTTTTTGAC CCACGCCGCG CTCGAAGCAG GCGACAACCA GGCCCAGGCC GGCCAGGACG CCGTGCAGCT GATGACGGTG CACTCGGCCA AGGGCCTGGA GTTCGACGCG GTCTTCATCA CCGGGCTCGA AGAAGGCCTG TTCCCGCACG AGAACTCGCT CAACAGCATC AGCGCCGGCG GCAACGAAGG CCTCGAAGAA GAGCGCCGGC TGATGTACGT GGCGATCACG CGGGCGCGGC AGCGGCTGTA CATCAGCTTC AGCCAGACCC GCATGCTGCA CGGCCAGACG CGCTACAACG TCAAGAGCCG CTTCTTCGAC GAGCTGCCCG AGGCGGCGCT GAAGTGGATC ACGCCCAAGC AGCAGGGTTT CGGCTCGGGT TACGCGCAGC AATACCAGCA GGCCTGGCAG CGCGGCTCGG GCCCCGGCGG CATGGTCGGC GCCGGGCGCA ACAGCGGCTG GCAACCGGCC CCGGCGGCGC CGCCGTCATG GGCCGCGCCG GTGCCCGCGG CGATGCGCCA GAGCGCGGCC AAGGACAACG GCCACGGCCT GCGCCAGGGC CAGGGCGTGT TCCACACCAA GTTCGGCGAG GGCGTGGTGC TGACGCTCGA AGGTGTCGGC GCGGACGCCC GCGCCCAGGT CAACTTCGGC CGCCACGGCA CCAAGTGGCT GGCACTCGCG ATCGCCAAGC TGACGCCGAT CGAGTGA
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Protein sequence | MSALPPSPPL PDSGHPAFAD IGFDEPDRRD ETHDPHEPPA RPALPAGLLA NLNPEQYAAV TLAAEPALIL AGAGSGKTRV LTTRIAWLLQ TGQIGPGGLM AVTFTNKAAK EMVHRLSTML PYNVRGMWIG TFHGLCNRFL RAHWKMAGLP QSFQILDSGD TLSAVKRVIK AMKLDEERFV PKQVSWFIAS SKDDGKRPKD LPTDDGQART MVEIYQAYED QCQREGVVDF AELMLRSYEL MRDHPEIREH YQRRFRHILV DEFQDTNRLQ YLWLKMFAGT PGALAGREPA AVFAVGDDDQ SIYAFRGAQV GNMSDFEREY RVRQVIKLER NYRSFGNILD SANALIAHNS RRLGKNLRTE AGPGEPVRIF ESTSDFAEAQ WLLEELQQLH RGGMARSETA ILYRSNAQSR VIESALFNAG MPYRVYGGLR FFERAEIKHA LAYLRLTENP NDDTSFLRVV NFPARGIGAR SVELLQDAAR ASGRSLYQSV GALGGAAGTK LAGFTALVDR LRDATRGLTL REIIERMLDA SGLINFYRTE KEGQDRIENL EELVNAAEAF VTIEGFGKDA VALPVDETAP GTIAAPLPGE PEAVAAVDLL PDAETGEILS PLAAFLTHAA LEAGDNQAQA GQDAVQLMTV HSAKGLEFDA VFITGLEEGL FPHENSLNSI SAGGNEGLEE ERRLMYVAIT RARQRLYISF SQTRMLHGQT RYNVKSRFFD ELPEAALKWI TPKQQGFGSG YAQQYQQAWQ RGSGPGGMVG AGRNSGWQPA PAAPPSWAAP VPAAMRQSAA KDNGHGLRQG QGVFHTKFGE GVVLTLEGVG ADARAQVNFG RHGTKWLALA IAKLTPIE
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