| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2762 |
|---|
| Symbol | |
|---|
| ID | 6163620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3041857 |
|---|
| End bp | 3042768 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641665539 |
|---|
| Product | chromosome segregation and condensation protein ScpA |
|---|
| Protein accession | YP_001791792 |
|---|
| Protein GI | 171059443 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.151501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCAAGC CGGCCACGCG GGCCCGGGCC GACAAGCCGG GCCCGGAGAC GCCGCTGCCT
GCGGCGAGCG TCGACGGCAC CAGCCCGGTG GTCGACAACG TGGCGGTGGC CACGCTCTAC
GGCGAGCCGC TGTTCGCGCT GCCGCAAGAC CTCTACATCC CGCCCGATGC GCTCGAGGTC
TTTCTCGAGA CCTTCCAGGG CCCGCTCGAC CTGCTGCTCT ACCTGATCCG CAGGCAGAAC
TTCAACATCC TCGACATCCC GATGGCGGAT GTGACGCGGC AGTACCTCGC CTACGTCGAG
CAGATCCGCG ACCGCAACCT CGAGCTCGCC GCCGAGTACC TGCTGATGGC GGCGATGCTG
ATCGAGATCA AGTCGCGCAT GCTGCTGCCC CCGAAGCGGG CCGAGGGCGG CGACGAAGCC
GAAGACCCGC GTGCCGAACT GGTGCGCCGG CTGCTCGAAT ACGAACGCAT CAAGCTCGGC
GCCGCGCATC TCGACGCGCT GCCGGTGCTG GGCCGCGACT TCCTGCGCGC GCAGGTCATG
ATCGAGCAGG CGCTGGCGCC GAGCTTTCCC GAGGTCAGCC TGATCGACCT GCGCGACGCC
TGGGCCGACG TGCTCAAGCG CGCCCGGCTC ACCCAGCACC ACCACATCAG CCGCGAACAC
CTGTCGGTGC GCGAGCACAT GACACAGCTG CTGCGGCGCC TGCAGGGCCG GCGCTTCGTC
GAGTTCCACG AACTCTTCGA GCTGAACTCC AGCCAGCCGG TGCGGGTGGT CACCTTCATC
GCGATGCTCG AACTGGCACG CGAACGACTG CTCGAGATCA CCCAGGCCGA GGCATTCGCG
CCGATCTACG TGCGCCTGGC GTATCAGGTC AAGGAAACCG GCAACAACGC GGAATCCGAC
CTCGAGGCGT AG
|
|---|
| Protein sequence | MSKPATRARA DKPGPETPLP AASVDGTSPV VDNVAVATLY GEPLFALPQD LYIPPDALEV
FLETFQGPLD LLLYLIRRQN FNILDIPMAD VTRQYLAYVE QIRDRNLELA AEYLLMAAML
IEIKSRMLLP PKRAEGGDEA EDPRAELVRR LLEYERIKLG AAHLDALPVL GRDFLRAQVM
IEQALAPSFP EVSLIDLRDA WADVLKRARL TQHHHISREH LSVREHMTQL LRRLQGRRFV
EFHELFELNS SQPVRVVTFI AMLELARERL LEITQAEAFA PIYVRLAYQV KETGNNAESD
LEA
|
|---|
| |