Gene Lcho_2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2753 
Symbol 
ID6163992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3032552 
End bp3033514 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content75% 
IMG OID641665530 
ProductLysR family transcriptional regulator 
Protein accessionYP_001791783 
Protein GI171059434 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.097787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TCGACGCGAT GCGCTACCTC GCTGCCCTGG AGCAGCACCG CCACTTCGGC 
CGCGCCGCGC TGGCCTGCCA CATCACGCAG CCGGCGCTGT CGAACGCGCT GCGTGCGCTC
GAGTCCGAAC TCGGCACCTC GATCGTGCGG CGCGGCCGCC AGTACGAAGG CCTGACGCCC
GAAGGCGAAC GCGTGCTCGC CAGCGCGCGG CGCATGCTGC ACGAGCAGGA ACTGCTGCGC
CAGGACTTGG CCAGCAGCGC CGGCCAGCCC CAGGGCGTGT TGACGCTGGG CGCCGTGCCG
ACTGCCGTGC CGGTGGCGGC GCAGTTCGCG GTCTGGCTGC GGCGAAACCA TCCGGGCCTG
CGCGTGGTGC TGCGCGGGCT CAGCTCGCCG GCCATCGAGG CCGGGCTGGA GAACCTGGCG
GTCGACCTGG CGCTGGGCTA CACCGGCCGC CCCGACGCGC AGGCGCGCTC GCTGCAGATC
CGGCCGCAGT ACGAGGAACA CTATTTCGCC GTGCGGCGCG AGCCGCCGGC CGACGAGCCG
GTGCCCGCAC CCGCCGCCGG CCTGAGCCTG GGCGCGCCGC TGCGCTGGGC CGACCTGGCG
CACCAGCCGC TGCTGCTGCT GACGCCCGAG ATGCACAACC GCTCGATCAT CGACGCGGCG
TTCGAGAGCG CCGCGGTGGC ACCGCCCGCC GCCATCGAGA CCGACTCGGT GCTGGCCCTG
ATCACCGCCG TGCAGACCGG CCCGTTCAGC GCCGTGCTGC CCGGCGCGCT GCTGCGCACG
CTGGCCCCGC AGGCGCCGGT GACGGTGCAC CCGCTGGTCG AGCCCGAACT GCGCACGCCG
ATCGGGTTCA TGAGCCTGGG CAGCAGCCGG CCGTCGCGCG CGCTGGAGGC CGCGCAGGCG
CTGGCCGCGT CGGTCGAATG GCTCGCCCAT CTGAAGACCC AGACCGGCGC CTGGCCGGCT
TGA
 
Protein sequence
MNLLDAMRYL AALEQHRHFG RAALACHITQ PALSNALRAL ESELGTSIVR RGRQYEGLTP 
EGERVLASAR RMLHEQELLR QDLASSAGQP QGVLTLGAVP TAVPVAAQFA VWLRRNHPGL
RVVLRGLSSP AIEAGLENLA VDLALGYTGR PDAQARSLQI RPQYEEHYFA VRREPPADEP
VPAPAAGLSL GAPLRWADLA HQPLLLLTPE MHNRSIIDAA FESAAVAPPA AIETDSVLAL
ITAVQTGPFS AVLPGALLRT LAPQAPVTVH PLVEPELRTP IGFMSLGSSR PSRALEAAQA
LAASVEWLAH LKTQTGAWPA