Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2753 |
Symbol | |
ID | 6163992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3032552 |
End bp | 3033514 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641665530 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001791783 |
Protein GI | 171059434 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.097787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC TCGACGCGAT GCGCTACCTC GCTGCCCTGG AGCAGCACCG CCACTTCGGC CGCGCCGCGC TGGCCTGCCA CATCACGCAG CCGGCGCTGT CGAACGCGCT GCGTGCGCTC GAGTCCGAAC TCGGCACCTC GATCGTGCGG CGCGGCCGCC AGTACGAAGG CCTGACGCCC GAAGGCGAAC GCGTGCTCGC CAGCGCGCGG CGCATGCTGC ACGAGCAGGA ACTGCTGCGC CAGGACTTGG CCAGCAGCGC CGGCCAGCCC CAGGGCGTGT TGACGCTGGG CGCCGTGCCG ACTGCCGTGC CGGTGGCGGC GCAGTTCGCG GTCTGGCTGC GGCGAAACCA TCCGGGCCTG CGCGTGGTGC TGCGCGGGCT CAGCTCGCCG GCCATCGAGG CCGGGCTGGA GAACCTGGCG GTCGACCTGG CGCTGGGCTA CACCGGCCGC CCCGACGCGC AGGCGCGCTC GCTGCAGATC CGGCCGCAGT ACGAGGAACA CTATTTCGCC GTGCGGCGCG AGCCGCCGGC CGACGAGCCG GTGCCCGCAC CCGCCGCCGG CCTGAGCCTG GGCGCGCCGC TGCGCTGGGC CGACCTGGCG CACCAGCCGC TGCTGCTGCT GACGCCCGAG ATGCACAACC GCTCGATCAT CGACGCGGCG TTCGAGAGCG CCGCGGTGGC ACCGCCCGCC GCCATCGAGA CCGACTCGGT GCTGGCCCTG ATCACCGCCG TGCAGACCGG CCCGTTCAGC GCCGTGCTGC CCGGCGCGCT GCTGCGCACG CTGGCCCCGC AGGCGCCGGT GACGGTGCAC CCGCTGGTCG AGCCCGAACT GCGCACGCCG ATCGGGTTCA TGAGCCTGGG CAGCAGCCGG CCGTCGCGCG CGCTGGAGGC CGCGCAGGCG CTGGCCGCGT CGGTCGAATG GCTCGCCCAT CTGAAGACCC AGACCGGCGC CTGGCCGGCT TGA
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Protein sequence | MNLLDAMRYL AALEQHRHFG RAALACHITQ PALSNALRAL ESELGTSIVR RGRQYEGLTP EGERVLASAR RMLHEQELLR QDLASSAGQP QGVLTLGAVP TAVPVAAQFA VWLRRNHPGL RVVLRGLSSP AIEAGLENLA VDLALGYTGR PDAQARSLQI RPQYEEHYFA VRREPPADEP VPAPAAGLSL GAPLRWADLA HQPLLLLTPE MHNRSIIDAA FESAAVAPPA AIETDSVLAL ITAVQTGPFS AVLPGALLRT LAPQAPVTVH PLVEPELRTP IGFMSLGSSR PSRALEAAQA LAASVEWLAH LKTQTGAWPA
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