Gene Lcho_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2752 
Symbol 
ID6163991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3031894 
End bp3032415 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content74% 
IMG OID641665529 
ProductNADH dehydrogenase (ubiquinone) 24 kDa subunit 
Protein accessionYP_001791782 
Protein GI171059433 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0899324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC CCCAAGATGC CGACGCGGCG CTCGCCACCG TGCGCGCCGT GATCGCCGAG 
CGCGCCCACC TGGCCGGCGC GCTGCTGCCG ATCCTGCACG GCGTGCAGGA CGCCATCGGC
CACATCCCGA GCGAGGCGGT GCCCGAGATC GCCCGCGCGC TCAACCTGTC GCGCGCCGAG
GTGCACGGCG TGATCACCTA CTACCACCAC TTCCGCGCCG AGCCGGCCGG TCGCCACGTG
CTGCAGGTCT GCCGGGCCGA GTCGTGCCAG GCGCGTGGCG GCGAGGCGCT GCTGGCGCAG
GCGCGCGAGC GGCTGGGCTG CAGCGCCGAC GTGCACCGCT CGGCCGACGG CGCCTGGAGC
GTCGAGCCGG TCTATTGCCT GGGCCTGTGC GCGTCGTCGC CGGCGATCCA GATCGACGAG
CGTCAGCACG CTCGCGTGAC CGCCACCCGG CTCGATGCGC TGCTCGACGC TACCGAGGCG
CGTGATGCCG CCTCGGCCAT GGCGCAGGAG GCCACGGCAT GA
 
Protein sequence
MNRPQDADAA LATVRAVIAE RAHLAGALLP ILHGVQDAIG HIPSEAVPEI ARALNLSRAE 
VHGVITYYHH FRAEPAGRHV LQVCRAESCQ ARGGEALLAQ ARERLGCSAD VHRSADGAWS
VEPVYCLGLC ASSPAIQIDE RQHARVTATR LDALLDATEA RDAASAMAQE ATA