Gene Lcho_2734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2734 
Symbol 
ID6161810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3015743 
End bp3016147 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID641665511 
Productflagellar basal-body rod protein FlgB 
Protein accessionYP_001791764 
Protein GI171059415 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000288784 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCAACC GCATCACCGA CACGCTGAAC TTCCAGTCGC AGGCCCTGGT GCTGCGCTCC 
GAGCGCCAGC GCCTGATCGC CAGCAACATC GCCAACGCCG AGACGCCCGG CTACGTCGCC
CGCGATCTCG ATTTCGCCAG CGCGCTCAAG CAGGCCGTCG GCGAGCAGTC GGTCGGCGGT
GCGCTGGCCA CCACCCACGG TGGCCACATC CCGGTGGCGG TGGGCGCCAG GTCGGCGTCG
CAGCTGACGT ACGCCACCGC GAGCCAGAGC AGCCTCGACA ACAACACCGT CGACATGGAC
CGCGAGCGCG CCAGCTTCGC CGACAACGCG GTCAAGTACG AGTCGACGCT GCGCTTCATC
AACGGCAGCG TCTCGACGCT GATGTCGGCC ATCAAGGGCC AGTGA
 
Protein sequence
MLNRITDTLN FQSQALVLRS ERQRLIASNI ANAETPGYVA RDLDFASALK QAVGEQSVGG 
ALATTHGGHI PVAVGARSAS QLTYATASQS SLDNNTVDMD RERASFADNA VKYESTLRFI
NGSVSTLMSA IKGQ