| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2733 |
|---|
| Symbol | |
|---|
| ID | 6163471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3015298 |
|---|
| End bp | 3015708 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641665510 |
|---|
| Product | flagellar basal-body rod protein FlgC |
|---|
| Protein accession | YP_001791763 |
|---|
| Protein GI | 171059414 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1558] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000108424 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATGC TCAACATCTT CAACGTCGCC GGCAGCGCGG TCAGCGCGCA GAGCCAGCGG
CTCAACGCGG TGGCCACCAA CCTGGCCAAC GCCGACACCG TCGCCGGCCC CGACGGCCAG
AGCTTCAAGG CCCGCCAGGT GATGTTCCAG TCGGTGCAGA TGGGCGAGAT GGGCGCCGCC
GGCGTCAAGG TCTCGCAGAT CACCGAGGAC CAGAGCCCCG GCCGCCGCGT GCACGACCCC
AAGCACCCGC AGGCCGACGC CGAGGGCTAC GTGACCTACA GCAACGTCAA CGCGGTCGAG
GAGATGGTCA ACATGATCTC GGCCTCGCGC TCGTACCAGA ACAACGTCGA GGTGATGAAC
ACCGCCAAGA CGCTGCTGCT CAAGACACTG CAGATGGGCC AGGGCTCGTG A
|
|---|
| Protein sequence | MSMLNIFNVA GSAVSAQSQR LNAVATNLAN ADTVAGPDGQ SFKARQVMFQ SVQMGEMGAA
GVKVSQITED QSPGRRVHDP KHPQADAEGY VTYSNVNAVE EMVNMISASR SYQNNVEVMN
TAKTLLLKTL QMGQGS
|
|---|
| |