Gene Lcho_2732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2732 
Symbol 
ID6163470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3014557 
End bp3015231 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID641665509 
Productflagellar hook capping protein 
Protein accessionYP_001791762 
Protein GI171059413 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000455072 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACCA CCGTCACCGG TTCCACCAAC AGCTCGGCCT CGATCTATTC GCAGCTCTCG 
GGCAGCGGCA GCACGGCCAG CACCACCGAG GCCTCGGCCG ACCGCTTCCT CAAGCTGCTG 
GTCGCGCAGA TGCAGAACCA GGATCCGCTC AGCCCGATGG ACAACGCCCA GGTCACCAGC 
CAGATGGCGC AGATCAACAC CGTCTCGGGC ATCGAGAAGG TCAACGAGAG CATCCAGGCG 
ATGGGCGGCC AGTTCACCCA GATGCAGGCG CTGCAGGGCG CGCAACTGGT CGGGCAGGGC 
GTGATGGTTG CGGGCAAGGG CCTGAATCTC GACCCCGCCA CCGGCCAGGC CAGCGCCGGC 
TACGAACTCG CCGGCCCGGC CGATGCCGCC CGGATCGAGG TGCTGTCGGC CGCCGGCCGG 
GTGATCGACA CCGTCGACCT GGGCGCCGAG ACGTCCGGGC GCCACAGCTT CACCTGGGCA 
CCGGCGCAGA TGCCGGCCGA CACCAGCGGC ATCAGCTTCC GGGTCGTCGC CACCAACGGC 
GCGGCCGCCG TCACCAGCAC GGCGCTGGTG CGCGATCAGG TGGTCGCGGT CAGCAACAGC 
AGCGGCAGCC TCAAGCTCGA CCTCGCCAGC GGCAACCAGA TCAACTACGG CGACGTCAAG 
GCGTTCTCGT CCTGA
 
Protein sequence
MSTTVTGSTN SSASIYSQLS GSGSTASTTE ASADRFLKLL VAQMQNQDPL SPMDNAQVTS 
QMAQINTVSG IEKVNESIQA MGGQFTQMQA LQGAQLVGQG VMVAGKGLNL DPATGQASAG 
YELAGPADAA RIEVLSAAGR VIDTVDLGAE TSGRHSFTWA PAQMPADTSG ISFRVVATNG 
AAAVTSTALV RDQVVAVSNS SGSLKLDLAS GNQINYGDVK AFSS