| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2731 |
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| Symbol | |
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| ID | 6163469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3012992 |
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| End bp | 3014497 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665508 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791761 |
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| Protein GI | 171059412 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000961084 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTTCC AGCAAGGCCT CTCCGGTCTC AACGCCACCA GCAAGAACCT CGAGGTGATC
GGCAACAACG TCGCCAATGC CAACACCTAC GGCACCAAGG CCTCGCGGGC CGAGTTCGCC
GACATGTACG CCAGCACGAT CAACAACATC GGCACCGGCA ACGTCGGCAT CGGCGTGCAG
GTGGCTGCGG TGTCGCAGCA GTTCACGCAG GGCAGCCTGT CGGCCACCGA CAACCCGCTG
GACATGGCGA TCAACGGCGC CGGCTTCTTC CAGGTCAAGG ACACCGCCGG CAACCAGCTC
TACACCCGCA ACGGCCAGTT CAAGCTCGAC AAGGAAGGCT TCATCGTCAA CAACTCGGGC
CAGAAGCTGC TCGGCTACCC GGCCAACGCC GACGGCGTGG TGGTGCCGGG TGCGGCCGGC
GCGCTGCAGC TGCCGACCGC CGGCATCGCG CCGATGGCGA CCGACGAGGT CAAGATGGAG
ATGAACCTCG ACTCGCGCGG CGTGCTGACC GATCCGACCG CCGTGGCCAA CAAGGCTGCC
GCCGATGCGG TGACCGCCCA GGCCGCCGCC GACGCCGCGG TCGTGACCAC GCAGGCCGCC
TACGACACCG CCCAGGCCAA CGCCGACGCC GCGCCGGCCG ACACCCGGCT GCAGTCGCTG
GCGACGGCGG CGCTGGCCGC CCGCGACCGC GCCGTCACGG TGGCCGCGCA GGCGGCCACC
ACGGTGACGA CCACGGCCGA CGCCGCGGCC GCCGCGCCGC TGGCCGCGCA GATCGACTTC
GAGGATCCCG CCTCCTACAA CAAGGCGACC TCGATGACGG CCTACGACGT CAAGGGCCAG
CCGGTGGCGA TGACCTACTA CTTCCAGAAG AGCGCGCCCG ACACCTGGAA CATCTACGCC
ACCGCCAACG GCACCTCGAT CAACGTCGAC GCCAGCGGCC GCCCGGTGCC GGTGACGCAG
CTGCAGTTCC CGACCAGCGG CGCGGCGCCG ATCTCGCCGG CCGCACCGGT CGTCTTCGAC
GTGCCCGGCA CCACCGCCGC CGACGGCTCG ACCACCGAGC CGATCACCGG CGTGAGCTTC
GACTTCACCC AGGCCACGCA ATACGGCGCC ACCTTCAGCG TCACCGACCT GACCCAGAAC
GGCTATGCGC CCGGCGAGAT GTCGAGCCTG AACGTCGAGA GCAACGGCAT CATCACCGCG
CGCTATTCGA ACGGCCTGAC CAAGTCGGCC GGCCAGATCG AGGTGGCGAA CTTCCGCAAC
CCGCAGGGCC TGCAGGCGGT GGGCGGCAAC GCCTGGGCCT CGACCTTTGC CTCCGGCAGC
GCCACCGTCG GCACGCCCGA TTCGGGCAAC TTCGGCCAGC TGCAGTCGGG CTCGCTGGAA
GACTCGAACG TCGACCTGAC CGCCGAACTC GTCAACATGA TCACCGCGCA GCGGGTCTAC
CAGGCCAACG CGCAGACCAT CAAGACGCAG GACTCGGTGC TGCAGACGCT GGTCAACCTG
AAGTGA
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| Protein sequence | MNFQQGLSGL NATSKNLEVI GNNVANANTY GTKASRAEFA DMYASTINNI GTGNVGIGVQ
VAAVSQQFTQ GSLSATDNPL DMAINGAGFF QVKDTAGNQL YTRNGQFKLD KEGFIVNNSG
QKLLGYPANA DGVVVPGAAG ALQLPTAGIA PMATDEVKME MNLDSRGVLT DPTAVANKAA
ADAVTAQAAA DAAVVTTQAA YDTAQANADA APADTRLQSL ATAALAARDR AVTVAAQAAT
TVTTTADAAA AAPLAAQIDF EDPASYNKAT SMTAYDVKGQ PVAMTYYFQK SAPDTWNIYA
TANGTSINVD ASGRPVPVTQ LQFPTSGAAP ISPAAPVVFD VPGTTAADGS TTEPITGVSF
DFTQATQYGA TFSVTDLTQN GYAPGEMSSL NVESNGIITA RYSNGLTKSA GQIEVANFRN
PQGLQAVGGN AWASTFASGS ATVGTPDSGN FGQLQSGSLE DSNVDLTAEL VNMITAQRVY
QANAQTIKTQ DSVLQTLVNL K
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