| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2727 |
|---|
| Symbol | flgI |
|---|
| ID | 6163465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3009516 |
|---|
| End bp | 3010694 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641665504 |
|---|
| Product | flagellar basal body P-ring protein |
|---|
| Protein accession | YP_001791757 |
|---|
| Protein GI | 171059408 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1706] Flagellar basal-body P-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000228637 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGC TGCTTGACTC GCTGACCGGC CCGCTGGCCG AACGCCAGAA AGACCTGCAG
GATCGCCTGC TGCGCGGCGC CCTCTGGCTG GCGCTGGTGC TGGCCAGCAC GGCACTCTGG
TGGCCGGCCC CCGCCCACGC CACCCGCATC AAGGAAGTCG CCAGCGTGCA GGGCGTGCGG
CCCAACCAGC TGGTCGGCTA CGGCCTGGTG GTGGGCCTGG ACGGCACCGG CGACCAGACC
ACGCAGACCC CGTTCACCGC GCAGAGCCTG ACGGCGATGC TGCAGCAGCT CGGCGTGACC
GTGCCGCCGG GCACCAACAT GCAGATCAAG AACGTCGCCG CGGTGATGGT GACGGCCACG
CTGCCGCCGT TCGCGCAGCC CGGCCAGTCG GTCGACGTGA CCGTGGCCTC GCTCGGCAAC
GCCAAGAGCC TGCGCGGCGG CACGCTGATC GGCACGCCCC TGCGCGGCGC CGACAACCAG
ATCTACGCGC TCGCGCAAGG CAACCTGATC ATCGGTGGCG CCGGCGCCTC GGCGGGCGGC
TCGAAGGTGC AGGTCAACCA CCTGTCGGCC GGCCGCATCC CCGACGGCGC CACCGTCGAG
CGCGCGGTGC CCACGCCGCT GGCCGAGGGC GATTCGCTGC AGCTCGACCT CAAGTCGAGC
GATTTCGCCA CCGCCCGCGC GGTCTCGCAG GCCATCAATG AACGCTTCGG CAAGGGCACG
GCCAGCGCGA TGGACGGCCG CGTGGTGCGC GTCAAGATGC CCGCCACGCC CGACGAGCGC
GTCAACTTCC TGGCCGACAT GGAAAACCTG GCGATCGAGC TGGCCAAGCC GGCCGCCAAG
GTCATCGTCA ACGCCCGCAC CGGCTCGATC GTGATGAACC AGGCCGTCAC GCTGGCCGCC
TGCGCGGTGG CGCACGGCAA CCTGTCGGTC ACGATCACCT CGACGCCGCA GGTCAGCCAG
CCCGCGCCGT TCTCGAACGG CCAGACCACC GTCACCGAAA AGACCGACAT CAAGATCAAC
CAGGAGCCCG GCTCGCTGAT CCAGCTGAAG GAAGGCACCC AGCTCACCGA CGTGGTGAAG
GCGCTCAACT CGCTCGGTGC CACGCCCGGT GACCTGCTGG CGATCCTGCA GGCGATCAAG
GCGGCGGGCG CCCTGAACGC GGAGCTGGAG GTCATCTGA
|
|---|
| Protein sequence | MDTLLDSLTG PLAERQKDLQ DRLLRGALWL ALVLASTALW WPAPAHATRI KEVASVQGVR
PNQLVGYGLV VGLDGTGDQT TQTPFTAQSL TAMLQQLGVT VPPGTNMQIK NVAAVMVTAT
LPPFAQPGQS VDVTVASLGN AKSLRGGTLI GTPLRGADNQ IYALAQGNLI IGGAGASAGG
SKVQVNHLSA GRIPDGATVE RAVPTPLAEG DSLQLDLKSS DFATARAVSQ AINERFGKGT
ASAMDGRVVR VKMPATPDER VNFLADMENL AIELAKPAAK VIVNARTGSI VMNQAVTLAA
CAVAHGNLSV TITSTPQVSQ PAPFSNGQTT VTEKTDIKIN QEPGSLIQLK EGTQLTDVVK
ALNSLGATPG DLLAILQAIK AAGALNAELE VI
|
|---|
| |