Gene Lcho_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2706 
Symbol 
ID6162312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp2976907 
End bp2977335 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID641665483 
Productsuccinate dehydrogenase, cytochrome b556 subunit 
Protein accessionYP_001791736 
Protein GI171059387 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0569975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT CGACCCCGCA ACGCCCGGTC TTTCGCAACA TCCACATCAC CGACATCGCG 
AGCTACCGGT TACCCCCGGC GGGCATCGTG TCGATCCTGC ACCGCGTCAG CGGCGCGATG 
ATGTTTCTCC TGTTGCCCCT GATCATCTGG TTCTTCGATA CCAGCGTGAC TTCCGAGGTG 
TCGTACGAAG AGTTCACCGC GGCATTCAGT TCCGGTATCG GATTCGTGCC GGGCGTGCTG 
GTCAAGCTGG TGGCGCTGGG CCTGATCTGG GCCTACCTGC ACCACTTCAT CGCCGGCGTG 
CGCCATCTCT GGATGGACGC CACCCACAGC GTCACCAAGC AGCATGGCCA CTCTTCGGCG 
CTGGTCACGC TGGTTTCCAG CGTGCTGCTG ACGCTGGCGC TGGGCGCCAA GCTCTTCGGT 
CTGTTCTGA
 
Protein sequence
MADSTPQRPV FRNIHITDIA SYRLPPAGIV SILHRVSGAM MFLLLPLIIW FFDTSVTSEV 
SYEEFTAAFS SGIGFVPGVL VKLVALGLIW AYLHHFIAGV RHLWMDATHS VTKQHGHSSA 
LVTLVSSVLL TLALGAKLFG LF