| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2700 |
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| Symbol | |
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| ID | 6162320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2971226 |
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| End bp | 2972119 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665477 |
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| Product | succinyl-CoA synthetase subunit alpha |
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| Protein accession | YP_001791730 |
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| Protein GI | 171059381 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0712833 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATTC TCATCAACAA AGACACCCGC GTCATCACGC AGGGCATCAC CGGCAAGACC
GGCCAGTTCC ACACGCTGGG CTGCCAGGCC TATGCCAACG GCAAGAACGC CTTCGTCGCG
GGCGTGAACC CGAAGAAGGC GGGCGAGAAG TTCGCCGACA TCCCCATCTA CGCCAGCGTC
AAGGAAGCCG CGCAGCAGCA AGGCGCGACC GTCAGCGTGA TCTACGTGCC GCCCGCCGGC
GCGGCAGCGG CGATCTGGGA AGCGGTCGAA GCCGACCTGG ACCTGGCGAT CTGCATCACC
GAAGGCATCC CGGTTCGGGA CATGCTCGAA GTGCGCAACA AGATGAAGGC CAAGGAAGCC
GCCGGCGGCA AGAAGACGCT GCTGCTGGGC CCCAACTGCC CGGGCCTGAT CACGCCCGAG
GAGATCAAGA TCGGCATCAT GCCCGGCCAC ATCCACCGCA AGGGCCGCAT CGGCGTGGTG
AGCCGTTCGG GCACGCTGAC GTATGAAGCG GTCGCCCAGC TGACCGAGAT CGGCCTGGGC
CAATCGAGCG CGGTGGGCAT CGGCGGCGAC CCGATCAACG GCTTGAAGCA CATCGACGTG
ATGCGCGCCT TCAACGACGA TCCGGACACC GATGCGGTGA TCATGATCGG CGAGATCGGC
GGCCCCGATG AAGCCGAAGC GGCGATGTGG TGCAAGGCGA ACATGAAGAA GCCGATCGTC
GGTTTCATCG CGGGCGTGAC GGCGCCCGCG GGCAAGCGCA TGGGCCATGC CGGTGCGCTG
ATCAGCGGTG GCGCGGACAC GGCGGACGCC AAGCTCGCGA TCATGGAGGA GTGCGGTTTC
ACGATCACCC GCAACCCCAG CGAGATGGCA CGCCTGCTGA AGGCGCTGCT GTAA
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| Protein sequence | MSILINKDTR VITQGITGKT GQFHTLGCQA YANGKNAFVA GVNPKKAGEK FADIPIYASV
KEAAQQQGAT VSVIYVPPAG AAAAIWEAVE ADLDLAICIT EGIPVRDMLE VRNKMKAKEA
AGGKKTLLLG PNCPGLITPE EIKIGIMPGH IHRKGRIGVV SRSGTLTYEA VAQLTEIGLG
QSSAVGIGGD PINGLKHIDV MRAFNDDPDT DAVIMIGEIG GPDEAEAAMW CKANMKKPIV
GFIAGVTAPA GKRMGHAGAL ISGGADTADA KLAIMEECGF TITRNPSEMA RLLKALL
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