Gene Lcho_2691 details

Gene Information

• Locus tag: Lcho_2691
• Symbol: prpE
• ID: 6162672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 2959304
• End bp: 2961202
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641665468
• Product: propionyl-CoA synthetase
• Protein accession: YP_001791721
• Protein GI: 171059372
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.347843
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGAATT ACGTTGATTT CCATCGCCGC TCGATCGACG ACCGCGAGGG CTTCTGGGGC 
GAACAGGCCC AGCTCGTGCA CTGGCACGAA CAGCCGACAC AGGTGTGCGA CTACAGCAAT 
CCGCCGTTCG CCAAATGGTT CGTCGGCGGC AAGACCAACC TCTGCTACAA CGCCGTCGAC 
CGCCACCTGG TCGATCGGCC TGATCAGAAC GCGCTGATCT TCGTCTCGAC CGAAACCGAG 
CAGGAAAAGA TCTACAGCTT CCGCGACCTG CACGCCGAAG TGCAGCGCAT GGCGGCGATC 
CTGCAGGCCC AAGGCGTGAC CAAGGGCGAC CGTGTCCTGA TCTACATGCC GATGATCCCC 
GAGGCCGCGT TCGCGATGCT GGCCTGCGTG CGCATCGGCG CGATCCACTC GGTGGTGTTC 
GGCGGCTTTG CCAGCCACTC GCTGGCCAGC CGCATCGACG ACTCGCAGCC CAAGGTCATC 
GTCAGTGCCG ACGCCGGCAT GCGCGGCGGC AAGGTCGTGC CCTACAAGCA CCTGCTCGAC 
GAAGCCATCA ACCTGGCCGA CAACAAACCC GCCCGCGTGC TGATGGTCGA CCGCGGCCTG 
GCCCCGTTCG CCAAGACCGA CGGCCGCGAT ATCGACTACG CCGAACTGCG CGCCGCGCAC 
ATGGACACCG TCGTGCCGTG CGAGTGGGTC GACGCCACCC ACCCGAGCTA CACGCTCTAC 
ACCAGCGGCA CCACCGGCAA GCCCAAGGGC GTGCAGCGCG ACACCGGCGG CTACACCGTC 
GCGCTGGCCG CGTCGATGAA ACACATCTAC ATGGGCGAGC CGGGCGAGAC CTACTTCAGC 
ACCAGCGACA TCGGCTGGGT GGTGGGCCAC AGCTACATCA TCTACGGGCC CCTGATCGGC 
GGCATGGCCA CGATCATGTA CGAAGGCCTG CCGATCCGCC CCGATGCCGG CATCTGGTGG 
AGCCTGGTCG AGAAGTACAA GGTCACCGTG ATGTTCAGCG CTCCGACCGC GGTGCGCGTG 
CTCAAGAAGC AGGACCCGGC CTTCCTGACC AAGTACGACT TGAGCAGCCT GAAGGCACTG 
TTCCTGGCCG GTGAGCCGCT CGACGAGCCC ACCGCCAAGT GGATCTCCGA AGCGCTGGGC 
AAGCCGATCG TCGACAACTA CTGGCAGACC GAGACCGGCT GGCCGATCCT GGCGATCTGC 
AACGGCGTCG AAAGCGCGCC CAGCAAGTTC GGCTCGCCCG GCAAGGCGGT CTACGGCTAC 
GACGTCAAGC TGATCGACGA GAGCACCGGC GAGGCCATCA CCGAGGCCAA CAAGAAGGGC 
GTGGTGGTGG TCGAGGGCCC CCTGCCGCCG GGCTGCCTGC AGACCGTGTG GGGTGACGAC 
AAGCGCTTCG TCAGCACCTA CTGGACCAGC TTCCCGTCCA AGCAGATGTA CAGCACCTTC 
GACTGGGGCG TGCGCGACGA GGACGGCTAC TACTTCATCC TCGGCCGCAC CGACGACGTC 
ATCAACGTGG CCGGCCACCG CCTGGGCACG CGCGAGATCG AGGAGAGCAT CTCCAGCCAC 
CCGGCGATCG CCGAAGTGGC GGTGGTGGGC GTGGCCGACC AGCTCAAGGG CCAGGTCGCG 
ATGGCCTTCG CGGTGCTCAA GGACGCCAGC CGCGCCGCCA ACGCCGACGA CGCCCGCAAG 
CTCGAAGCCG AGGTCATGAA GGTGGTCGAC GACCAGCTCG GCGCCGTGGC CCGCCCGGCC 
CGCGTGCGCT TCGTCACCGT GCTGCCCAAG ACCCGCTCGG GCAAGGTGCT GCGCCGTGCC 
ATCCAGGCTG TGTGTGAAGG CCGCGATTCA GGCGACCTGA CGACGATGGA AGACCCGGCG 
GCGCTGGCGC AGATCAAGGA TCTGGTCACG CCGGCCTGA 

 

Protein sequence

MTNYVDFHRR SIDDREGFWG EQAQLVHWHE QPTQVCDYSN PPFAKWFVGG KTNLCYNAVD 
RHLVDRPDQN ALIFVSTETE QEKIYSFRDL HAEVQRMAAI LQAQGVTKGD RVLIYMPMIP 
EAAFAMLACV RIGAIHSVVF GGFASHSLAS RIDDSQPKVI VSADAGMRGG KVVPYKHLLD 
EAINLADNKP ARVLMVDRGL APFAKTDGRD IDYAELRAAH MDTVVPCEWV DATHPSYTLY 
TSGTTGKPKG VQRDTGGYTV ALAASMKHIY MGEPGETYFS TSDIGWVVGH SYIIYGPLIG 
GMATIMYEGL PIRPDAGIWW SLVEKYKVTV MFSAPTAVRV LKKQDPAFLT KYDLSSLKAL 
FLAGEPLDEP TAKWISEALG KPIVDNYWQT ETGWPILAIC NGVESAPSKF GSPGKAVYGY 
DVKLIDESTG EAITEANKKG VVVVEGPLPP GCLQTVWGDD KRFVSTYWTS FPSKQMYSTF 
DWGVRDEDGY YFILGRTDDV INVAGHRLGT REIEESISSH PAIAEVAVVG VADQLKGQVA 
MAFAVLKDAS RAANADDARK LEAEVMKVVD DQLGAVARPA RVRFVTVLPK TRSGKVLRRA 
IQAVCEGRDS GDLTTMEDPA ALAQIKDLVT PA