| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2684 |
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| Symbol | |
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| ID | 6162846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2948203 |
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| End bp | 2953047 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665461 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001791714 |
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| Protein GI | 171059365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.631766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGC CCAATCCGGA GTCCCGCCAA CGGTTGCTCG AAGAAGCGAT GACGCTCGCG
CAGCAACGCC TGGCGCCTGC CGCCTTCGCC ATTGCCGAGC CCTTCCTGCG CCACTACCAC
GGACAGGTGG CCGACGAACA GATCCTCGGC AGCACGGCCG CCGACCTGTT CGGGGGCGCG
ATGGCCCATT GGCAGTTCGC TCGCCGCTTC ACGAGCGGCA CGCCGCGTGT GCGTGCTTAT
GTGCCGCGCG TGGCCGAACA TGGCTGGGAG TCGCGCCACA CGGTGATCGA GATCGTCAAC
GACGACATGC CCTTCCTGGT CGATTCGGTC ACCACCGAGA TCAACCGGCT GGGCCTCACG
CTGCACTCGG TGATCCACCC CGTGATGCAC GCCTGGCGCG ACGCCGACGG CCAGCTCGAG
CGGCTGCGGC CCGCCAACGA GGCGGTTGCC GACGGTACCG GACACGACGA GTCCTACATC
CGGCTGGAAG TCGACCGCTG CACCGACCCG GCGCGGCAGG CCGAGATCCG CGACGGCATC
GTGCGTGTGC TCGGCGACGT GCGGGCCGCG GTGGAAGACT GGGCGCCGAT GCAGGCGGCC
GCATTCGCCG CGGTGGACGA GCTGAAGGCG CGCAGCGACG TCACCGGCGC GGCGATCGAG
GACAACGCCG AGGCGCAGTG TTTCCTGCGC TGGATGGTCG ACGACCATTT CACCTTCCTC
GGCTGCCGCG ACTACGAGCG GGTGGAGCAG GGCGGCGAGA GCCACCTGCG CGGTGTCGCC
GGCTCGGGCT TGGGGCTGTT GCGCGACGCG CGCCGCGATC CGCAGCGGCC CGACAGCACG
CTGCTGCCGG CGGGCTCGCT GGCGGTGATC GACGGGGCTT CACCGCTGTT CCTGACCAAG
GCCGACTCGC GTGCCACCGT GCACCGGCCG GGTTATCTCG ACTGCGTGGG CGTCAAGCGC
TACGACGCAC GGGGCCAGGT GGTCGGCGAA CGGCGTTTCC TCGGCCTCTA CACCTCGTCG
GCCTACCGGA TGCCGGCCAG CGAGATGCCG CTGGTGCGCC GCAAGGTGGC CACGCTGATG
GCGCGCAGCG GCTTCGTGCC CAAGGGCCAT CTGTCGAAGA CACTCGCGAC CGTGCTGGAG
CAGTATCCAC GCGACGAACT GCTGCAGATC GGCGAAGACG AGTTGCTGGA GACCGCGCTC
GGCATCCTGC ACCTCGAAGA GCGCCAGCGC AGCCGGCTGT TCGTGCGCCG CGATGCCTTC
GGCCGCTATG TGTCCTGCCT CGTGTTCGTG CCGCGCGACC GGTTCAACAC CGAGCTGCGC
ATGCGCATCC AGCAGTTGCT GAGTTCGGCC TTCCACGGGG TCGGCAGCGA GTTCAACCTG
CTGTTGTCGG AGTCGGTGCT GGCACGCATC CACATCATCG TGCGCACACC GCCGGGCAGC
GCGCTCGGCG AGGTCGACGT GCTCGAGCTG GAGGCTCGCA TCGTCGCGCT GGCACGCCGC
TGGCAGGACG ATCTGGCCGA TGCGCTGGTG GCCGGCCTGG GCGACGAGCT GGGCAGCCGT
CTGGCGCGGC GCTATGCAGC CGCCTTCCCG GCCGGCTACC GCGAGGATTG CGAGGCGCGC
GTGGCGGTCG GCGACATCGA GCTGGCGGAG CGAGCCGCAC GGTCGGGCGA GCTGGCGATC
AGCCTGTACC GACCGGTCGA GGCGGCGGCC GGTGCGCTGC GCCTGAAGAT GCTCCGGGTC
GGCCAGCCCA TCGCGCTGTC GCACAGCCTG CCGCTGCTCG AGCGCATGGG CGTGAAGGTC
ATCGACGAGC GTTCATGCCG CATCGCCCCG GAGGGCGGCG AGCCGGTCTG GCTGCACGAC
TTCGGCATGC AGATCGCCGA CGGCGGCGAG GTCGAGATCG AATCGATCAA GGGCAGCTTC
GAGGAGGCCT TCGCCAAGGT CTGGTCGGGC TCGCTCGAGA GCGACGACCT CAATCGACTG
GTCCTGAGCG CGCGCCTGTC GTGGCGCGAG GTGATGCTGC TGCGCGCCTA TGCGCGCTAC
ATCCGGCAGG TCGGCTCGAC CTTCAGCAAC AGCTACATCG AGCGGGCACT GACCGCCAAT
CCGGTGATCG CACGCACGCT GGTCGAGCTG TTCCAGGCGC GCTTCGACCT GACCCTCGGC
GAGGCCCGTG CCGCGCGTTG TGCCGCGCTC GACGAAGCGC TGCAGCAGCA GCTCGACGCG
GTCGCCAGCA TCGACGAAGA CCGCATCCTG CGGCAGTTCC TCGGCGTGAT CGGCGCCACG
TTGCGCACCA ACCATTTCCA GCGTGATGGC GCCGGCCAGC CCAAGCCCTA TCTGTCGTTC
AAGTTCGATC CCGCCCGGGT GCCGGGTCTG CCGTCGCCCA AGCCGATGTT CGAGATCTGG
GTCTATTCGC CGCGCTTCGA GGGGGTGCAT CTGCGCGGTG GCAAGGTCGC ACGCGGTGGC
CTGCGCTGGT CCGACCGGCG CGAAGACTTC CGCACCGAGG TGCTGGGGCT GGTCAAGGCG
CAGATGGTCA AGAACACCGT GATCGTGCCG GTGGGATCGA AGGGCGGATT CGTCGTCAAG
CAGCCGCCGC TGGGCGGCGA CCGCGATGCC CTGCTCGAGG AAGCGGTGGC CTGCTACAAG
AACTTCCTGC GCGGCCTGCT CGACCTGACC GACAACCTGG TGGCCGGCCA GGTGGTGGCG
CCGGTCGACC TGGTGCGCCA CGACGGCGAC GACCCCTATC TGGTGGTCGC CGCCGACAAG
GGCACGGCCA CCTTCTCCGA CCACGCCAAC GCCGTTTCGG CCGAATACGG CTTCTGGCTC
GGCGATGCCT TCGCCTCGGG CGGCTCGGTC GGCTACGACC ACAAGAAGAT GGGCATCACC
GCGCGCGGCG CCTGGGAGGC GGTCAAGCGC CACTTCCGCG AGATCGGCGT GAACACGCAG
GAACAGGACT TCAGCGTGGT CGGCATCGGC GACATGTCGG GCGACGTGTT CGGCAACGGC
ATGCTGCTGT CGCGCCACAT CCGCCTGGTG GCGGCTTTCG ACCATCGCCA CATCTTCCTT
GATCCACAGC CCGATGCCGC TGCGAGCCAT GCCGAACGGG CGCGCCTGTT CGCGCTGCCG
CGCTCGAGCT GGGCCGATTA CGACGGCGCA CTGATCTCGG CCGGTGGCGG GGTGTTCGCG
CGTTCGCTCA AGTCGATCCC GCTGTCGGGC CCGGTGCGTG CCGCGCTCGG CGTCACGGCC
GAGGAGCTCA GCCCGGCCGA GCTGATGCGC GCCATCCTGC AGGCGCCGGT GGACCTGTTC
TACAACGGCG GCATCGGCAC CTACGTGAAG GCCTCGCACG AAAGCCACGC GCAGGTCGGC
GATCGCGCCA CCGATGCGAT CCGCGTCAAT GGCGCCGAGC TGCGCTGCAA GGTGGTCGCC
GAGGGCGGCA ACCTGGGCCT GACCCAGCTC GGCCGCATCG AGTTCGCGCG TCGTGGCGGG
CGCATCTGCA CCGATGCGAT CGACAACTCG GCCGGGGTCG ACTGCTCCGA CCACGAGGTC
AACATCAAGA TCCTGGTCGA CCAGCTGGTC AGCGACGGCG AGATGACCGG CCGGCAGCGC
AACCAGCTGC TGGCCGACAT GACCGACGAG GTCGGCGAAC TGGTGCTGCT CGACAACTAC
GCGCAGACGC AGGCGCTGTC GGTGGCCGGC CGCCGCGCCG CCGAGCTGCT CGAGCCCGAG
GCGCGGCTGA TGCAGTTTCT CGAACGGGCC GGCCGGCTCG ACCGCTCGAT CGAGTTCCTG
CCGTCGGCCG AGGAGATCGC CGAACGCAAG CTGGCCCGGC AGGGCCTGAC CTCGCCCGAA
CGGGCGGTGC TGCTGGCCTA CAGCAAGATG TGGCTCTACG ACGAGATCCT GGCCTCCGAT
CTGCCCGAGG AGCCGTACGT GGCCGCGATG CTGTCGGCCT ACTTCCCGCA GGCGCTGCGC
CAGCGCCATG GCCAGGCGAT GCTGCGCCAT CCGCTCAAGC GCCAGATCCT CGCCACCTGC
CTGACCAACA CGCTGACGAA CCGGATCGGC CCGAGCTTCG TGCACCGGCT GGCCGAAGAG
ACCGGCCTGG GCGCGGTGGC GGTGGTGCGT GCGGCGATCG TGGCGCGCGA GGTGTTCGGT
CTGGACGAGG TGTGGTCGAG CATCGATGCG CTCGACAACC GTGTGCCCGA CAGCCTGCAG
GCGCGTCTGT TCGACGACGT CGCCGGCCTG ATGGCGCGCG CCAGCCTGTG GTTCCTGCGC
CAGCCGGCGA GCGCCGGCAT CGACGCGACG GTGGTGCGCT TCCGGCTCGC CGCCGACCAG
CTCGGCGCCA GCCTGGTGGC GCACCTGTCG CCTGCCGAAG CGAACGCGCT CGCGGGCCTC
CAGCACGCCG ACGTGCAGCT CGGCGTGCCC GCCGAACTGG CGCGCCGGGT CGCCAGCGCC
GACCGCATCG CGGCGGTGCT CGACATCGCC GAGGTGGCCG CCGCGACGCA GCGCAGCCTG
GAGCTGGTGG CGGGCACCTA CTTCGCGCTC GACGTCCAGC TGCAGCACGG CTGGATGCGG
CAGTCCGCTG CGGCGCTGCC GGCCGACAGC CATTGGCAGA CGCTGGCGCG CACCGCGCTG
CAGAACGACC TGACGCTGCT GCAGCGCGCG CTCACGGCCA AGGTGGTCGG CCGCTCGCCC
CAGCTCGATT CGGCGGAGGC CCTCGTCGAA AGCTGGCTGG CCGCCAGCCG CGCGGCCCTG
GAGCGCTATC GCCGCCTGCT GGCCGATCTG CAGTCGTCGA GCAGCGTCGA TCTGGCGATG
TTGTCGGTCG CCACACGCGA GCTGCGTGCG ATCGAGGCGG CCTGA
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| Protein sequence | MQTPNPESRQ RLLEEAMTLA QQRLAPAAFA IAEPFLRHYH GQVADEQILG STAADLFGGA
MAHWQFARRF TSGTPRVRAY VPRVAEHGWE SRHTVIEIVN DDMPFLVDSV TTEINRLGLT
LHSVIHPVMH AWRDADGQLE RLRPANEAVA DGTGHDESYI RLEVDRCTDP ARQAEIRDGI
VRVLGDVRAA VEDWAPMQAA AFAAVDELKA RSDVTGAAIE DNAEAQCFLR WMVDDHFTFL
GCRDYERVEQ GGESHLRGVA GSGLGLLRDA RRDPQRPDST LLPAGSLAVI DGASPLFLTK
ADSRATVHRP GYLDCVGVKR YDARGQVVGE RRFLGLYTSS AYRMPASEMP LVRRKVATLM
ARSGFVPKGH LSKTLATVLE QYPRDELLQI GEDELLETAL GILHLEERQR SRLFVRRDAF
GRYVSCLVFV PRDRFNTELR MRIQQLLSSA FHGVGSEFNL LLSESVLARI HIIVRTPPGS
ALGEVDVLEL EARIVALARR WQDDLADALV AGLGDELGSR LARRYAAAFP AGYREDCEAR
VAVGDIELAE RAARSGELAI SLYRPVEAAA GALRLKMLRV GQPIALSHSL PLLERMGVKV
IDERSCRIAP EGGEPVWLHD FGMQIADGGE VEIESIKGSF EEAFAKVWSG SLESDDLNRL
VLSARLSWRE VMLLRAYARY IRQVGSTFSN SYIERALTAN PVIARTLVEL FQARFDLTLG
EARAARCAAL DEALQQQLDA VASIDEDRIL RQFLGVIGAT LRTNHFQRDG AGQPKPYLSF
KFDPARVPGL PSPKPMFEIW VYSPRFEGVH LRGGKVARGG LRWSDRREDF RTEVLGLVKA
QMVKNTVIVP VGSKGGFVVK QPPLGGDRDA LLEEAVACYK NFLRGLLDLT DNLVAGQVVA
PVDLVRHDGD DPYLVVAADK GTATFSDHAN AVSAEYGFWL GDAFASGGSV GYDHKKMGIT
ARGAWEAVKR HFREIGVNTQ EQDFSVVGIG DMSGDVFGNG MLLSRHIRLV AAFDHRHIFL
DPQPDAAASH AERARLFALP RSSWADYDGA LISAGGGVFA RSLKSIPLSG PVRAALGVTA
EELSPAELMR AILQAPVDLF YNGGIGTYVK ASHESHAQVG DRATDAIRVN GAELRCKVVA
EGGNLGLTQL GRIEFARRGG RICTDAIDNS AGVDCSDHEV NIKILVDQLV SDGEMTGRQR
NQLLADMTDE VGELVLLDNY AQTQALSVAG RRAAELLEPE ARLMQFLERA GRLDRSIEFL
PSAEEIAERK LARQGLTSPE RAVLLAYSKM WLYDEILASD LPEEPYVAAM LSAYFPQALR
QRHGQAMLRH PLKRQILATC LTNTLTNRIG PSFVHRLAEE TGLGAVAVVR AAIVAREVFG
LDEVWSSIDA LDNRVPDSLQ ARLFDDVAGL MARASLWFLR QPASAGIDAT VVRFRLAADQ
LGASLVAHLS PAEANALAGL QHADVQLGVP AELARRVASA DRIAAVLDIA EVAAATQRSL
ELVAGTYFAL DVQLQHGWMR QSAAALPADS HWQTLARTAL QNDLTLLQRA LTAKVVGRSP
QLDSAEALVE SWLAASRAAL ERYRRLLADL QSSSSVDLAM LSVATRELRA IEAA
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