| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2665 |
|---|
| Symbol | |
|---|
| ID | 6162011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2925304 |
|---|
| End bp | 2925879 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641665441 |
|---|
| Product | cobalbumin biosynthesis protein |
|---|
| Protein accession | YP_001791695 |
|---|
| Protein GI | 171059346 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCCG CCGCTGCCTT GCATGAGCTG ATCCTCGGCG GCCAGAAAAG TGGCAAGTCG
CGCTGCGCCG AGCAGCGCGC TGCCACCTGG CTGGCGCTGC CGGGCCAGCG TGCCGTGCTG
GTGGCCACCG CGCTGGCCGG TGACGACGAG ATGCGCGCGC GCATCGCCCG TCACCGGTCG
GACCGCGGCG TCCACGTGCC GGCGCTGGCG ACGATCGAGG AACCGCTCGA CCTCGCCTGC
GCCATTGCCC GCCTCAGCGA CCCGGGCTGC CTGGTGCTGG TCGACTGCCT GACGCTGTGG
CTGACCAACT GGCTGATGCC GATGGCCGGC GATGTGGACG AAGCCGGCTG GGCCGCGCAG
CGCGCGGCGC TGATGGCGGC GGTCGAATCC GTGCCCGGCC CGCTGGTGCT GGTGTCCAAC
GAGATCGGCC TCGGCCTGTC GCCCATGCGT GCCGAGGCGC GCCGCTTCGT CGACGAACTC
GGCCGCCTGC ACCAGGATCT GGCGCAGTGC TGCAGCCGCG TCACGCTGAT GGTGGCGGGG
CTGCCGTTGA CGATCAAGCC GGGGGCGTCG TCATGA
|
|---|
| Protein sequence | MRSAAALHEL ILGGQKSGKS RCAEQRAATW LALPGQRAVL VATALAGDDE MRARIARHRS
DRGVHVPALA TIEEPLDLAC AIARLSDPGC LVLVDCLTLW LTNWLMPMAG DVDEAGWAAQ
RAALMAAVES VPGPLVLVSN EIGLGLSPMR AEARRFVDEL GRLHQDLAQC CSRVTLMVAG
LPLTIKPGAS S
|
|---|
| |