| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2663 |
|---|
| Symbol | |
|---|
| ID | 6162009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 2923392 |
|---|
| End bp | 2924399 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641665439 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001791693 |
|---|
| Protein GI | 171059344 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC TCGAACGCCA GCGCCGACAG CGCCTGGCCT GGGCGCTGCT GCTGATCGCG
CTGGCCGGCA GCTTCGCGGG CCTGCTGGCC GGCAGCGAGG GCTGGCGCCT GCCCTCGCTC
GACGACCCGA CCGCCGAGCT GATCGTCTGG CAGATCCGCG CCCCGCGCAC GCTCGGTGCC
TGGCTGGTGG GCGCGCTGTT CGGGCTGTCC GGCGCGATCG CGCAGGGGCT GTTCCGCAAT
CCGCTGGCCG ATCCGTACCT GCTCGGCTCG GCGGCCGGTG CATCGCTCGG CGTGGTGCTG
GTGCTGGCCG CCGGCAGCCT GGTCGGCAGC GGGCTGAGCC TGGCGGGCGC CGAACTGCTG
GCGCGTTTCG GCCTGGTCGG CGCGGCGTTC GGCGGCGCGC TGCTGGGCGT GAGCCTGACG
CTGATGCTCG CCCGCGGCGC CGAACACACC ACCCGGCTGC TGCTGGCCGG CGTGGTGGTG
GGTGTGGTGC TGGGCGCGCT CAACGATCTG GTGACGATGG TGTCGCCCGC CGCCTTGCGC
GGCAAGCAGG CGTTTCTGCT CGGCAGCACC GGCTTTCTCG GCTGGCCGAG CGTGGCGCTG
CTGGCCGCGG CGCTGGCCGC GACGCTGCCG CTGGCCTGGC GGCTGGCGCG CACGCTCGAT
GCACTCAGTC TGGGCGAAGA CAGCGCCAGC AGCCTCGGCC TGTCGCTGCC GCGCCTGCGC
GCCGCGCTGG TCGTGCTGAT GGCGCTGGCG ACCGGCACGG CGGTGGCGCA GGCCGGGCTG
GTGGCGTTTG TCGGGCTGGT CGCGCCGCAT CTGGTGCGGC GCTTCGTGCA CGCGACGCAC
GGCTATCGAC TCGCTGCGAG CGCCGCGATG GGCGGCGCCC TGCTGCTGCT GGCCGACGTG
GCCGCACGCT GCGTGATCGC GCCGCAGGAG CTGCCGGTGG GCGTGCTGAC CGCCGTGCTG
GGCGGGCTCT ATCTGCTGTG GCTGCTGCAT CGGCGGGGGC TGGGATGA
|
|---|
| Protein sequence | MSELERQRRQ RLAWALLLIA LAGSFAGLLA GSEGWRLPSL DDPTAELIVW QIRAPRTLGA
WLVGALFGLS GAIAQGLFRN PLADPYLLGS AAGASLGVVL VLAAGSLVGS GLSLAGAELL
ARFGLVGAAF GGALLGVSLT LMLARGAEHT TRLLLAGVVV GVVLGALNDL VTMVSPAALR
GKQAFLLGST GFLGWPSVAL LAAALAATLP LAWRLARTLD ALSLGEDSAS SLGLSLPRLR
AALVVLMALA TGTAVAQAGL VAFVGLVAPH LVRRFVHATH GYRLAASAAM GGALLLLADV
AARCVIAPQE LPVGVLTAVL GGLYLLWLLH RRGLG
|
|---|
| |