| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2660 |
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| Symbol | |
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| ID | 6162006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2919911 |
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| End bp | 2920990 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665436 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001791690 |
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| Protein GI | 171059341 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA TCCCGACCCT CGAAGACCTC CACGACGCCA GCCTCGCCGC TCAGGTACAG
CAGCAGATCG ACCGCAAGAC CAAGCCGCTG GGCGCGCTCG GCCGGCTGGA GGCGCTGGCG
CTGCAGCTGG CGCTGATCCA GGGCCGCACG CTGCCACGGC TGGAGCAGCC GCAGCTGGTG
GTGTTCGCCG CCGATCACGG TCTGGCCGCG CGCGGCGTGT CGGCGTATCC GAGCGACGTG
ACCTGGCAGA TGGTCGAGAA CTTCCTCGCC GGCGGCGCGG CGGTCAGCGT GCTGGCGCGC
CAGCACGGCC TGGCGCTGAC GGTGGTCGAC GCGGGCGTGC GCCACGACTT CGCGCCGCGC
CCCGGCCTGC TGCTGCGCAA GATCGGCCCC GGCAGCGCCG ACATGCTGGC CGGCCCGGCG
ATGAGCGCGG TGCAGTGCGA GCAGGCCATC CGCGCCGGCC GCGAGGTGGT GCGCGGCCTG
CCGGGTAATG CGCTGGCGCT GGGCGAGATG GGCATCGGCA ACACCTCGGC GGCGGCGCTG
CTGCTCGCGC GCCTGAGCGG CGAGCCGCTG TGGCGCTGCG TCGGCCGCGG CACCGGCTTG
GACGACGCCG CGCTGGCGCG CAAGACCGCG CTGCTCGGCG AGGTGCTGGT CCATCACGTC
GACGCCACCG AGCCGCTGGC CGTGCTGGCC GCGATGGGCG GTTTCGAGAT CGCGATGCTG
GTCGGCGCCA TGCTGCAGGC CGCCGCCGAA CGGCGCGTGA TCCTGATCGA CGGCTTCATC
GTCGGCGCCG CCTTGCTGGT GGCCGCGCGG CTGCAGCCGG CGGTGCTGCA GCGCTGCGTG
TTCGCACACC GTTCGGACGA GTCCGGCCAT GCGCTGCTGC TGGCGCAGCT CGGTGCGCGG
CCGCTGCTCG ACCTCGGCCT GCGCCTGGGC GAAGGTTCCG GCGCGGCGCT GGCCTGGCCG
CTGCTGGAGT CGGCCTGTCG CATCCTGGCG GAGATGGCGA GTTTCGAGTC GGCCGGCGTG
AGTGATGCCT CGACTGATGC CTCGACCGGA CCGGCCGCCG GATCGACCCC GCAGCCGTGA
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| Protein sequence | MNLIPTLEDL HDASLAAQVQ QQIDRKTKPL GALGRLEALA LQLALIQGRT LPRLEQPQLV
VFAADHGLAA RGVSAYPSDV TWQMVENFLA GGAAVSVLAR QHGLALTVVD AGVRHDFAPR
PGLLLRKIGP GSADMLAGPA MSAVQCEQAI RAGREVVRGL PGNALALGEM GIGNTSAAAL
LLARLSGEPL WRCVGRGTGL DDAALARKTA LLGEVLVHHV DATEPLAVLA AMGGFEIAML
VGAMLQAAAE RRVILIDGFI VGAALLVAAR LQPAVLQRCV FAHRSDESGH ALLLAQLGAR
PLLDLGLRLG EGSGAALAWP LLESACRILA EMASFESAGV SDASTDASTG PAAGSTPQP
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