Gene Lcho_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2655 
Symbol 
ID6162799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2916592 
End bp2917230 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID641665431 
Productendonuclease III 
Protein accessionYP_001791685 
Protein GI171059336 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCG ACCAGATCCA GCGCTTTTTC AGCACCTTGC GGGCCGCCAA CCCGATGCCA 
GCGTCCGAAC TAGAATACAG CTCGGTGTTC GAGTTGCTCG CGGCGGTGCT GCTGTCGGCG 
CAGGCCACCG ATGTCAGCGT CAACAAGGCC ACGCGGCGGC TGTTCCCGGT GGCCAACACG 
CCGGCCAAGC TGCTCGCGCT GGGCGAGGAG CGGGTGGCCG AGCACATCAA GACCATCGGC 
CTGTACCGCA ACAAGGCGAA GAACCTGGTC GAGACCTGCC GCCTCCTGCT GGCCCGGCAC 
GGCGGCCAGG TGCCGCACAG CCGCGAGGCG CTCGAAGCCC TGCCCGGCGT GGGCCGCAAG 
ACCGCCAACG TGGTGCTCAA CGTGGCCTTC GGCGAGCCGA CCTGCGCGGT CGACACGCAC 
GTCTTTCGCG TCGGCAACCG CACCGGGCTG GCCCCGGGCA GGACACCGCA TGAAGTCGAG 
ATGCAGTTGC TCGAACGTGT GCCCGACGAG TTCAAGGTCG AGGCCCACCA CTGGCTGATC 
CTGCACGGCC GCTACGTCTG CCAGGCGCGC AAGCCGCAGT GCTGGCTGTG CAGCGTGGCC 
GACTGCTGCG ATTTCGAGCC CAAGACAGCC GCGCCCTGA
 
Protein sequence
MQADQIQRFF STLRAANPMP ASELEYSSVF ELLAAVLLSA QATDVSVNKA TRRLFPVANT 
PAKLLALGEE RVAEHIKTIG LYRNKAKNLV ETCRLLLARH GGQVPHSREA LEALPGVGRK 
TANVVLNVAF GEPTCAVDTH VFRVGNRTGL APGRTPHEVE MQLLERVPDE FKVEAHHWLI 
LHGRYVCQAR KPQCWLCSVA DCCDFEPKTA AP