| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2647 |
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| Symbol | |
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| ID | 6161167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2909098 |
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| End bp | 2910312 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665423 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_001791677 |
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| Protein GI | 171059328 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCAT ACAAACAAGG CGCTGACGCG CTGTTCATCC TGCTGGGCGC CATCATGGTG
CTGGCCATGC ACGCCGGCTT TGCGTTTCTG GAACTGGGCA CGGTGCGCAA GAAGAACCAG
GTCAACGCGC TGGTCAAGAT CCTGGTCGAC TTCGCGGTCT CGACCATCGC CTACTTCTTC
GTCGGCTACA GCGTGGCCTA CGGCGTGAGT TTCTTCACCG GCGCTGAGGC GCTGGCGGCC
AAGAATGGCT ACGAGCTGGT CAAGTTCTTC TTCCTGCTGA CGTTTGCGGC GGCGATCCCC
GCGATCGTGT CGGGTGGCAT CGCCGAGCGC GCGCGCTTCG GCCCGCAGCT GATCGCCACC
GCGGTGATCG TCGGGCTGAT CTATCCGCTG TCCGAAGGGG CCGTCTGGAA TCAGCAGTTC
GGCCTGCAGG CCTGGCTGAA ATCGACCTTC GGCGCCGAGT TCCATGACTT CGCCGGCAGC
GTGGTGGTGC ACGCGGTGGG CGGCTGGATC GGCCTGGCCG CCGTGCTGCT GCTGGGTGCG
CGCACCGGTC GATACCGCAA GGACGGCGCC GGGCGCCAGC AGATCAGCGC CCATCCGCCG
TCGAGCATCC CGTTCCTGGC GCTGGGTGCC TGGGTGCTGG CGGTGGGCTG GTTCGGCTTC
AACGTGATGA GCGCGCAGAC GCTCGACAAG ATCTCCGGCC TGGTGGCCGT CAACTCGCTG
ATGGCGATGG TCGGCGGCAC GCTGGTGGCG GTGCTGATGG GCAAGAACGA CCCGGGCTTC
GCCTACAACG GCCCGCTCGC CGGGCTGGTG GCGGTGTGTG CGGGCTCCGA CCTGATGCAC
CCGGCCGGCG CGTTGGTGGT CGGCGGCGTG GCCGGGGCGA TCTTCGTCAG CCTGTTCACC
CTGACCCAGA ACCGCTGGAA GATCGACGAC GTGCTCGGCG TCTGGCCGCT GCACGGCCTG
TGCGGCGCCT GGGGCGGCAT CGCCTGCGGC ATCTTCGGCC AGCAGGCGCT GGGCGGCATC
GGCGGGGTCA GCCTGGCCAG CCAGTCGATC GGCACGCTGC TGGCGGTGAT CTGGGCGTTT
GCGGGCGGCT TGGCCGTCTA CGGCGCGATC CGCCTGTTCA CCAGCCTGCG CCTGACGCAG
GAAGAAGAGT TCGACGGCGC CGACATCTCG ATCCACAAGA TCGGCGCCAC GCCCGATCGC
GACGTCAGCT GGTGA
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| Protein sequence | MDSYKQGADA LFILLGAIMV LAMHAGFAFL ELGTVRKKNQ VNALVKILVD FAVSTIAYFF
VGYSVAYGVS FFTGAEALAA KNGYELVKFF FLLTFAAAIP AIVSGGIAER ARFGPQLIAT
AVIVGLIYPL SEGAVWNQQF GLQAWLKSTF GAEFHDFAGS VVVHAVGGWI GLAAVLLLGA
RTGRYRKDGA GRQQISAHPP SSIPFLALGA WVLAVGWFGF NVMSAQTLDK ISGLVAVNSL
MAMVGGTLVA VLMGKNDPGF AYNGPLAGLV AVCAGSDLMH PAGALVVGGV AGAIFVSLFT
LTQNRWKIDD VLGVWPLHGL CGAWGGIACG IFGQQALGGI GGVSLASQSI GTLLAVIWAF
AGGLAVYGAI RLFTSLRLTQ EEEFDGADIS IHKIGATPDR DVSW
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