| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2642 |
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| Symbol | |
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| ID | 6160921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2902943 |
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| End bp | 2904199 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665418 |
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| Product | cupin 4 family protein |
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| Protein accession | YP_001791672 |
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| Protein GI | 171059323 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2850] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCC CGAAAAGCCG CGCTGCATCC GCTGCAGCCC AACCCGCCAA GCCCTCGGTC
ACGAAGGGCT CGACGCCGTC TCCCGTCCAT CCTGACGCGG CCGTGCCGCC GCTCGACCTG
CCCTGCGAGC TGCTCGGCGG GCTCAGTCCG TCGGTCTTCA TGCAGCGCCA CTGGCAGCGC
AAGCCGCTGC TGGTGCGCCA GGCCGTGCCG GGCATCGAGC CGCCGGTGTC GCGCGCGCAG
ATGTTCGCGA TGCTCGAAGA CGATGCGGTC GAGTCCCGAT TCCTGAGCCG TCAGGGCGAG
GGCGACCGGC AGACGTGGCA GTTCAAGCGC GGACCGATGC CGCGCCGCTC GCTGCCGGCC
ATCAAGCAAC CCGGCTGGAC GGTGCTGGTG CAGGGCCTCA ACCTGCACGT GCCGGCTGCC
GCCGACCTGC TGAACCGCTT CCGCTTCGTG CCACAGGCCC GGCTCGACGA TCTGATGATC
TCCTGGGCCA GCGAGGGGGG CGGTGTCGGG CCGCACTTCG ACTCCTACGA CGTCTTCCTG
ATCCAGGTGG CGGGCCGGCG GCGCTGGCGC ATCGGCCGCC TGCCCGACGC GCGCCTGAGG
GAAGGGCTGC CGGTCAAGAT CATCGAGAAC TTCCGTCATG AAGAAGAGTG GGTGCTCGAG
CCGGGCGACA TGCTCTACCT GCCGCCCGGC TGGGCCCATG ACGGCGATGC GGTCGACGGC
GAGTGCATGA CGTGCTCGGT GGGTTTCCGC TCGCCGCAGC GCAGCGAACT GGTGCGCGAG
ACGCTGCTGC GTCTGGCCGA CGGCATCGAC GATCCGGCCG ATGCCGGTGC GCGCCCGCCG
GTCTATCGCG ACCCCAAGCA GTCGGCCACC GCGGCGCCCG GGCGCATCCC GGCCGAACTG
CTGGCGTTTG CCGAGCAGGG CCTGATGCGC GCGCTGGCCG AGCCTGGCGC ACTCGCGCGC
GCGTTGGGCG AGTACCTGAG CGAGCCCAAG GCGCAGGTCA GCTTCGAGCT CGGCGAGCCG
CTGCCTGACG GTGTGGGTGT CCGGCTCGAT GACCGCAGCT GCCTGCTCTA CGACGACGGC
CACGTCTATT GCAACGGCGA TTCGTGGCGT GCGGCGGGCC GCGATGCGGC GATGCTGCAT
CTGCTGGCCG ACGCGCGCCA ACTCGATGCC ACCACCCTGC GCCGAGCCAG TCCGGCGTTG
CGTGCCTTGC TGGAGCAGTG GGCTGACGAC GGCTGGCTGC ACCCGCTGGC TGGCTGA
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| Protein sequence | MNLPKSRAAS AAAQPAKPSV TKGSTPSPVH PDAAVPPLDL PCELLGGLSP SVFMQRHWQR
KPLLVRQAVP GIEPPVSRAQ MFAMLEDDAV ESRFLSRQGE GDRQTWQFKR GPMPRRSLPA
IKQPGWTVLV QGLNLHVPAA ADLLNRFRFV PQARLDDLMI SWASEGGGVG PHFDSYDVFL
IQVAGRRRWR IGRLPDARLR EGLPVKIIEN FRHEEEWVLE PGDMLYLPPG WAHDGDAVDG
ECMTCSVGFR SPQRSELVRE TLLRLADGID DPADAGARPP VYRDPKQSAT AAPGRIPAEL
LAFAEQGLMR ALAEPGALAR ALGEYLSEPK AQVSFELGEP LPDGVGVRLD DRSCLLYDDG
HVYCNGDSWR AAGRDAAMLH LLADARQLDA TTLRRASPAL RALLEQWADD GWLHPLAG
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