| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2635 |
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| Symbol | |
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| ID | 6160973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2895186 |
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| End bp | 2897162 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665411 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001791665 |
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| Protein GI | 171059316 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCC CCAAACCCAA CAACGCCTAC GCCGAAGCCT CCATCCGGGT GCTCAAGGGC
CTCGAGCCCG TCAAGCAGCG CCCGGGCATG TACACCCGCA CCGACACGCC GCTGCACATC
GTGCAGGAAG CGATCGACAA CGCCGCCGAC GAGGCGCTGG CCGGTTACGG CAAGAGCATC
GCCGTCACGC TGCACGCCGA CGGCTCGGTC AGCGTCGAGG ACGACGGCCG CGGCATCCCC
TTCGGCCTGC ATCCCGAGGA GCAGGTGCCG GTGGTCGAGA TCGTCTTCAC GCGGCTGCAC
GCGGGTGGCA AGTTCGACAA GGGGTCGGGG GGCGCCTACA GCTTCTCGGG CGGCCTGCAC
GGCGTGGGCG TGAGCGTGAC CAATGCGCTG GCGACGCGGC TGCAGGTGCA GGTCAGTCGC
GACAAGAAGG TCGCGACGCT GGCGTTTGCC GGCGGCGACG TGATCGAGCC GCTGGTGGTG
CGGCCGATCG CCTCGGGCGA TCGCCGCCAG GGCACGTCGG TGCGGGTCTG GCCGGATCCG
AAGTATTTCG AGAGTGCCGA ACTGCCCCGC GGCGAGCTGA TGCACCTGCT GCGCAGCAAG
GCGGTGCTGA TGCCCGGCGT GACGGTGACG CTGCGCAACG AGAAGACCGG TGATGTCCAG
ACCTGGCTCT ACAAGGGCGG CCTGCGCGAC TACCTGATGC AGAACCTCAA CGCCGAGCCG
CTGATCCCGC TGTTCGAAGG CGAGCAGTAC GCCAGCGCCG GCGAGACCGA GAACTTCGCC
GAAGGCGAGG GCGCCGCCTG GTGCGTGGCC TTCATCGAAG AGGGCGTCAA CCTGCGCGAG
AGCTACGTCA ACCTGATCCC GACGGTGGCC GGCGGCACCC ACGAGGCGGG CCTGAAGGAC
GGTCTGTTCC AGGCCGTGAA AGGTTTCGTC GAGCTGCACG CGCTGTGCCC CAAGGGTGTC
AAGCTGATGC CCGACGACGT CTTCGGCCGC GCCAGCTTCG TGCTGTCGGC CAAGGTGCTC
GATCCGCAGT TCCAGGGCCA GACCAAGGAG CGGCTCAACA GCCGCGACGC ACTGCGCCTG
GTGACCGCCT TCGTGCGCCC GGCGCTGGAG CTGTGGCTCA ACCAGCACGT CGAACACGGC
AAGAAGCTCG CCGAACTGGT GATCCGCCAG GCCCAGGCGC GCCAGAAGGC CGGGCAGAAG
GTCGAGAAGA AGAAGGGCTC GGGCGTGGCC GTGCTGCCCG GCAAGCTGAC CGACTGCGAG
AGCCGCGACC TGAGCCTCAA CGAGGTGTTC CTGGTCGAGG GCGATTCGGC CGGCGGCAGC
GCCAAGATGG GCCGCAACAA GGAGACCCAG GCGATCCTGC CGCTGCGTGG CAAGGTGCTC
AACGCCTGGG AGGTCGAGCG TGACCGGCTG TTCGCCAACA ACGAGATCCA CGACATCGCG
GTGGCGGTGG GCGTCGACCC CCACGGCGCC AACGACAGCC CGGATCTGTC GGGCCTGCGC
TACGGCAAGA TCTGCATCCT GAGCGACGCC GACGTCGACG GCTCGCACAT CCAGGTGCTG
CTGCTGACGC TGTTCTTCCG GCATTTCCCC AAGCTGATCG AGAACGGCAA CATCTACATC
GCCAAGCCGC CGCTGTTCCG GGTCGACGCG CCGGCGCGCG GCAAGAAGCC GGCGGCCAAG
ATGTACGCGC TCGACGACGG CGAGCTGCAG GCCATCCTCG ACAAGCTGCG CAAGGAAGGC
GCGCGCGAAG GCAGCTGGAG CATCAGCCGC TTCAAGGGCC TGGGCGAGAT GAGCGCCGAG
CAGCTCTGGG AAACCACGCT CAACCCCGAC ACCCGCCGCC TGCTGCGGGT CGAATACGGC
CGGCTCGACT TCGCCGCCAC GGTGGATTCA CTGACCAAGC TGATGGGCAA GGGCGAAGCG
GCATCGCGCC GCGAGCTGAT GGAGCTGCAT GGCGATTCGG TGGTGGTCGA CGTCTGA
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| Protein sequence | MSTPKPNNAY AEASIRVLKG LEPVKQRPGM YTRTDTPLHI VQEAIDNAAD EALAGYGKSI
AVTLHADGSV SVEDDGRGIP FGLHPEEQVP VVEIVFTRLH AGGKFDKGSG GAYSFSGGLH
GVGVSVTNAL ATRLQVQVSR DKKVATLAFA GGDVIEPLVV RPIASGDRRQ GTSVRVWPDP
KYFESAELPR GELMHLLRSK AVLMPGVTVT LRNEKTGDVQ TWLYKGGLRD YLMQNLNAEP
LIPLFEGEQY ASAGETENFA EGEGAAWCVA FIEEGVNLRE SYVNLIPTVA GGTHEAGLKD
GLFQAVKGFV ELHALCPKGV KLMPDDVFGR ASFVLSAKVL DPQFQGQTKE RLNSRDALRL
VTAFVRPALE LWLNQHVEHG KKLAELVIRQ AQARQKAGQK VEKKKGSGVA VLPGKLTDCE
SRDLSLNEVF LVEGDSAGGS AKMGRNKETQ AILPLRGKVL NAWEVERDRL FANNEIHDIA
VAVGVDPHGA NDSPDLSGLR YGKICILSDA DVDGSHIQVL LLTLFFRHFP KLIENGNIYI
AKPPLFRVDA PARGKKPAAK MYALDDGELQ AILDKLRKEG AREGSWSISR FKGLGEMSAE
QLWETTLNPD TRRLLRVEYG RLDFAATVDS LTKLMGKGEA ASRRELMELH GDSVVVDV
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