| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2632 |
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| Symbol | |
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| ID | 6160970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2891010 |
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| End bp | 2893334 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665408 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001791662 |
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| Protein GI | 171059313 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCCA ACCCGAACGA TTTCTCGACG CTGCCGCCCG GTGACGACGG CGGCGATGCG
TTGACGCTGG CGCACTACGC CGAGCGGGCC TACCTCGAAT ACGCGCTCAG TGTCGTCAAG
GGCCGCGCCT TGCCGGATGT CTGCGACGGC CAGAAGCCGG TACAGCGGCG CATCCTCTAT
TCGATGCAGC GCATGGGCCT GGCCTTTGCC GGCGCCGGTG GCGCCAAGCC GGTCAAGTGC
GCGCGGGTGG TGGGTGACGT GCTCGGCCGT TATCACCCGC ATGGCGACAC CGCTGCCTAC
GACGCCCTGG TGCGCATGGC GCAGGACTTC AGCCAGCGCT ATCCGCTGGT CGACGGTCAG
GGCAATTTCG GCTCGCGCGA CGGCGATGGC GCCGCTGCGA TGCGCTACAC CGAAGCCCGG
CTGGCGCCGA TCGCGCGCCT GCTGCTCGAC GAGATCGACG AGGGCACGAT CGACTTCGTG
CCCAACTACG ACGGCTCGAC CGAAGAGCCC GCCCTGCTGC CGGCACGGCT GCCGTTCGTG
CTGCTCAACG GTGCGTCGGG CATTGCCGTC GGCCTGGCCA CCGAGGTGCC GAGCCACAAC
CTGCGCGAGG TGGCGGCGGC CGTGGTCGCC CTGATCCGCG ACGAACACCT GTCCGACGAG
GACTTGTACG CGCTGCTGCC CGCGCCCGAC TACCCGGGCG GCGGCCAGAT CATCAGCAGC
GAGACCGACA TCCGCGAGGC CTATCGCACC GGCCGCGGCT CGCTCAAGGT GCGCGCGCGC
TGGAAGATCG AGGAACTGGC GCGCGGTCAG TGGCAGCTGG TCGTGACCGA ACTGCCGCCG
GGCGCGAGCG CCCAGCGCGT GCTCGAAGAG ATCGAGGAAC TCAGCAACCC CAAGATCAAG
GCCGGCAAGA AGGCGCTCAG CACCGAGCAG GTGCAGAACA AGGCGCTGCT GCTGTCGGTG
CTGGACGGGG TGCGCGACGA GTCGAACAAG GACGCGATGG TGCGCATGGT GTTCGAGCCC
CGCAGCCGCA CGGTCGAGCA GCAGGAGCTG ATCACGATCC TGCTGGCGCA CACCAGCCTC
GAATGCTCGG CGCCGATCAA CCTGACGATG GTGGGCGCCG ATGGCCGGCC GACGCAGAAG
AGCCTGCGCC GCATCCTGGT CGAGTGGATC GGCTTTCGCC AGGCGACGGT GCGCCGGCGC
ACCGAGCACC GCCTGGCGCG CGTGCTCGAC CGCATGCACG TGCTCGAAGG CCGGCAGCTG
GTGCTGCTCA ACATCGACGA GGTGATCCGC ATCATCCGCG AGAGCGACGA GCCCAAGGCG
GCGCTGATCG CGCGCTTTGC GCTCAGCGAC CGGCAGGCCG AGGACATCCT CGAGATCCGC
CTGCGCCAGC TGGCGCGGCT GGAGGCGATC CGCATCGAAC AGGAGCTGGC CGAGTTGCGC
ACCGAACAGG GCAAGCTCGA CGACATCCTG GCCAACCCCG GCACGCTCAG GCGCCTGCTG
ATCCGCGAGA TCGAGGCCGA TGCCAAGGCC CACGGCGACG CCCGCCGCAC GCTGATCCAG
GCCGAGAAGA GGGCCGTCGT CGAGGTCAAG GTGGTCGACG AGCCGGTCAC GCTGGTGGTC
AGCCAGAAGG GCTGGGTGCG CGCCCGCACC GGCCACGGCC ATGATCCGGC GGGCTTCGCG
TTCAAGGCCG GGGACGGCCT GTACGGCACC TTCGAGTGCC GCACCGTCGA TGCGCTGGTG
GTGCTGGGCA GCGACGGGCG GGTCTACTCG GTGCCGGTCA ACACCCTGCC GGGCGCACGC
GGCGACGGCG TGCCGATCAC CTCGCTGATC GAACTGGAGG CGGGCAGCCA GATCCTGCAT
TACATCGCCG GTTCGGCGTC CACCCCGTTG TTGCTGGCGC ACAGTGGCGG CACCGGCCTG
CTGGCGCAGA TCGGCGACCT GATCAGCCGT CAGAAGGGCG GCAAGGCCTT CCTGACGCTG
GAGCCGAGCG AGCGCTGCCT GCCGCCGCTG CCGGTGGCGC TGGAACACCG GCAGGTCGCC
TGCCTGTCGA GCTCAGGGCG CTTGCTGGTG TTCGGTCTGG ATGAACTCAA GCGCCAGCCC
AACGGCGGGC GCGGCCTGAT GCTGATGGAT CTGGACGAGG CCGATGCCCT GGCGGCCGTG
GCAACCTTCG GCGCCGTGCT CAAGCTGGTC GGCACCGGCC GGGGCGGCAA GGTGCGCGAA
GACACCTTGC GCGCACCGTC GCTCGAGATC CACCTGGGCA AACGTGCCCG CAAGGGCAAG
CCGCTCGCCA GCAGCATGGC CGTGCAGCGC ATGCTGCCGG CCTGA
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| Protein sequence | MDPNPNDFST LPPGDDGGDA LTLAHYAERA YLEYALSVVK GRALPDVCDG QKPVQRRILY
SMQRMGLAFA GAGGAKPVKC ARVVGDVLGR YHPHGDTAAY DALVRMAQDF SQRYPLVDGQ
GNFGSRDGDG AAAMRYTEAR LAPIARLLLD EIDEGTIDFV PNYDGSTEEP ALLPARLPFV
LLNGASGIAV GLATEVPSHN LREVAAAVVA LIRDEHLSDE DLYALLPAPD YPGGGQIISS
ETDIREAYRT GRGSLKVRAR WKIEELARGQ WQLVVTELPP GASAQRVLEE IEELSNPKIK
AGKKALSTEQ VQNKALLLSV LDGVRDESNK DAMVRMVFEP RSRTVEQQEL ITILLAHTSL
ECSAPINLTM VGADGRPTQK SLRRILVEWI GFRQATVRRR TEHRLARVLD RMHVLEGRQL
VLLNIDEVIR IIRESDEPKA ALIARFALSD RQAEDILEIR LRQLARLEAI RIEQELAELR
TEQGKLDDIL ANPGTLRRLL IREIEADAKA HGDARRTLIQ AEKRAVVEVK VVDEPVTLVV
SQKGWVRART GHGHDPAGFA FKAGDGLYGT FECRTVDALV VLGSDGRVYS VPVNTLPGAR
GDGVPITSLI ELEAGSQILH YIAGSASTPL LLAHSGGTGL LAQIGDLISR QKGGKAFLTL
EPSERCLPPL PVALEHRQVA CLSSSGRLLV FGLDELKRQP NGGRGLMLMD LDEADALAAV
ATFGAVLKLV GTGRGGKVRE DTLRAPSLEI HLGKRARKGK PLASSMAVQR MLPA
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