Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2627 |
Symbol | |
ID | 6164010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2883016 |
End bp | 2884293 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665403 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_001791657 |
Protein GI | 171059308 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTGA CCTCACGCAC CGACCGCCGC AGCCCGCCCG GATCCAGCCC TCGCCAGATC AGGCACTCGG GCCTGCTGCG GCGCTGCGCG GCACGGGCTT TCGTGATCGG CGCCAGCCTG CTGGGCCTGG CGGCTGGCCA GGCCCAGGCG GCCCCGGCAC AGCCCGCCGC CCGCTCGGCG GCGGCCGAAA CCCAGACCCT GCGCCTGAAC GTGCCGGACG TGCAGGTGCT CGACCAGAAC GGCAAGCGCC GCTCCTTCTA TCGTGACCTG GTCGCCGGCC GCACGGTGGC GATCAACTTC ATCTTCACCT CCTGCACCTC GATCTGCTCG CCGCTGAGCG CGACCTTCAA GGCGATGCAG ACCGAAGTGG CGCGGCAGGC CGGCGGCGAT GTGCACTTCA TTTCGGTCAG TGTCGATCCG CTGAGCGACA CACCGGAAGA ACTGAACAAG TTCGCGCGCA AGTTCGAGGC CGGCCCGGGC TGGACGTTCG TGACCGGCTC GCGCAAGTCG ATCGACGCGA TCCTGAAGGC CTACGACGTC TCGGCCGGTG ACCCGAACGA CCACTCGCCG ATGATCTATC TGGGCCACGA ACCGAGCAAG CGCTGGGTCC GCACCTACGG GCTGGCTTCG CCGCAGCAAC TGGTCGAGCG GCTCACCGGG TTGTCCAAGG CCCCGTCGGC CACCGACGCC AAGGCCGCCA CCCAGGCGTC CGCCGATGCC ACCGCGGCGC AGATCGGCGC CATGCGGCAG ATCGCCGCCC AGCAGGCCAC CCGCGCGAGC GTGGTGTCCG CAGCCAGCGG CACACGCGGG GTCGACTACT TCACCAACCT GCCGCTGATG ACGCAGGACC GACCGCGTGT GCGCTTCTAC GACGACCTGA TCCGCGGCCG AGTGGTGCTG ATCACGTCGT TCTACACGAG CTGCAAGGAC GTCTGCTCGC CGGTGAGTTT CAACCTCGCC AAGGTCCAGG AACTGCTGGC GCAGGAAGTG GACACGCCGG TGCAGCTGAT CTCGATCAGC ACCGACTCCG GCATCGACAC GCCCGAGGTG CTGCGCGACT TTGCGCGCCG CCACAACGCG CAGCCGGGCT GGTCGTTCGT GACCGGCAAG AAGGAAAACG TCGACTGGGT GCTGCACAAG CTGGGCCTGT ACAACGAAAA GCCCGAGCAG CACACCGCCG TGCTCTGGGT CGGCAACGAT CGCACCGGCG CCTGGCTGAA GCTGCACGCG CTGGCACCGC CGCAGGCCAT CCTTGAGGCC GTGCGCAAGG TTCTTTGA
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Protein sequence | MHLTSRTDRR SPPGSSPRQI RHSGLLRRCA ARAFVIGASL LGLAAGQAQA APAQPAARSA AAETQTLRLN VPDVQVLDQN GKRRSFYRDL VAGRTVAINF IFTSCTSICS PLSATFKAMQ TEVARQAGGD VHFISVSVDP LSDTPEELNK FARKFEAGPG WTFVTGSRKS IDAILKAYDV SAGDPNDHSP MIYLGHEPSK RWVRTYGLAS PQQLVERLTG LSKAPSATDA KAATQASADA TAAQIGAMRQ IAAQQATRAS VVSAASGTRG VDYFTNLPLM TQDRPRVRFY DDLIRGRVVL ITSFYTSCKD VCSPVSFNLA KVQELLAQEV DTPVQLISIS TDSGIDTPEV LRDFARRHNA QPGWSFVTGK KENVDWVLHK LGLYNEKPEQ HTAVLWVGND RTGAWLKLHA LAPPQAILEA VRKVL
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