| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2624 |
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| Symbol | |
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| ID | 6164007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2874913 |
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| End bp | 2875632 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665400 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001791654 |
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| Protein GI | 171059305 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTT TGCTTGCTGA AGACGATGCC CTGCTGGGCG ATGGATTGCG CGCTGGCCTG
CGTGCCCTGG GCTTCCAGGT CGACTGGGTG CGCGACGGGG TGGCGGCCGA GCGCGAACTC
TCCAACCAGA GCTATACCGC CGCCGTGCTG GATCTCGGCC TGCCGCGCAT CGATGGTCTC
GACGTGCTGC AGGCGGTGCG TCGGCGTGGC GTCAAGACAC CGGTGCTGGT GCTGACCGCC
CGTGATGCCG TGCCCCAGCG CATCGAGACC CTCGATGCCG GTGCCGACGA CTATGTCGTC
AAGCCGATCG ACCTGCACGA ACTGGCCGCA CGGCTGCGTG CCCTGGTGCG CCGCTCGCAC
GGTCAGGTGC AGGACCTGAT CAGCGTCAAC GGCGTCGATC TCGATCCCGG TGCCCGCGAG
GTCAGGCTCG ACGGCGATCC GATCAAGCTG TCGACCCGCG AGTTCGACCT GCTGCACGCG
CTGATGCTTC GGCCGGGCCG GGTCCTGACC CGCGAACAGC TCGAGAACCA CCTCTACGGC
TGGGGCGAGG AGGTCGGCAG CAACACGGTC GAGGTGCACG TCCACCACCT GCGGCGCAAG
CTCGGCAACC AGCGCATCCG CACCGTGCGC GGCGTCGGTT ACGCATTTGC GCCGCCGCCG
TCGAGCGAGG CGCCGCTCGA TGCCGCACAG GCCGGCCCTC TGGCCCAGCC GATGGACTGA
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| Protein sequence | MRLLLAEDDA LLGDGLRAGL RALGFQVDWV RDGVAAEREL SNQSYTAAVL DLGLPRIDGL
DVLQAVRRRG VKTPVLVLTA RDAVPQRIET LDAGADDYVV KPIDLHELAA RLRALVRRSH
GQVQDLISVN GVDLDPGARE VRLDGDPIKL STREFDLLHA LMLRPGRVLT REQLENHLYG
WGEEVGSNTV EVHVHHLRRK LGNQRIRTVR GVGYAFAPPP SSEAPLDAAQ AGPLAQPMD
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