Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2623 |
Symbol | |
ID | 6162995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2873350 |
End bp | 2874909 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641665399 |
Product | histidine kinase |
Protein accession | YP_001791653 |
Protein GI | 171059304 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACAAGC CTGTACGCGC CTGGTCGCTC CAGCACGGCC TGCAGTGGCG TGTGCTCGGT GCCGTGCTGG TCCTGTGGCT GGGTGTCGCC AGTTATGCCT GGTACAACCT GAGCCAGCAG GTCGACGATC TGCTGGATGG CCATCTGGCC CAGGGCATGG CGCTGCTGAT GGCGCTGCAG GTGCAGGACC ACGAGTTCGA CGAGATGCTC GGCGTCGATC ACATCACGAC CCCTGACCAC GCGCCGCCCG GTGCGCCACC CAGCTGGTCC GGCAGCACGG ATGCCGAACT CGCGCTGCAT CGCTACGCCA CCAAGGCGGT CTTCCAGGTC TGGTATCAGG GTCAGCTGCT GCTGCGTTCG TCCGATGCGC CCAACGAGCC GCTGGCCGAG CTCAAGCCCG GCTTTTCGGA CACCGTCGTC AAGGGCGTGG CCTGGCGGGT CTACACCGCC CCGGCGATCC GGCCCGATTC CTACGTGATC ATGGGCGAGT CGCGCGAGGC GCGCGTGGAG ATCATGAGTT CCATCCTGCG CGACACTTGG GTGCCGATGC TCGCCGGGCT GCCGCTGGTC GCGCTGGCGA TCTGGCTGGC GGTGCGCCAG GGGCTGGTTC CGGTGGTTCG ATTGGGATCT CAAGTGAGCG CTCGCAAACC TGATGCACTC GATCCGATCG CCATCGAGGA CTCGCCGCGC GAGCTGGCGC CGCTGATCGC GGCGCTGAAC CAGCTCTTCA TCCGCATGGA AAGTTCGCTC GAATCCGAGC GCCGCTTCAC CTCCGATGCG GCGCACGAAC TGCGCACGCC GATCGCGGGC ATCCGGGCGC AGGCGCAGGC CGCACTCGAG GTGTCCGATG ACGCGCAGCG CCGCCAGGCC CTGCACGGCA CGCTCGCCGG CTGCGACCAC GCAGCCCACC TGGTCGACCA GCTGCTGCAG CTGGCCCGGC TCGAAGGCGC GCGGGCGCCG AACACGCCGT CCAAGGTGAG CGACGTGCTG GTGGTGGCGC GCGAAGAAGT CGTCGAACTG GCCAGCAAGG CGTTCGAGTC CGGTCATGAG CTGGTGCTCG AAACCGGTGA CCTGCCCGGG TCCTGGCTGA TGGCGGCCGA CCCGGTGCTT GTCAGCGCAC TGCTGCGCAA CCTGATCGAC AACGCCTTGC GCTACAGCCC GCCGATGTCG ACCGTCCAGG TCACGTTCGA GGCTGTCGAT GCGCAGGGCC GGCTGTGGGT CAGCGTCGAG GACAGCGGAC CGGGTCTGTC ACCGCCCCTG CTGCAGCGCC TGGGCGAGCG GTTTTTCAGG GCGCGCCTGA ACGACGCGTC AGGCAGCGGC CTGGGCTGGT CGATCGTGCG CCGGATCGCG GCGGCACTGG ATCTGGTGGT GCAGGTCGAC CGTTCGCCGA CGCTCGGCGG TTTGCGGGTG CGAATCGGCT GGATGCCGGC GAGCGCGCCG GCACGGCCTC AGGGCTGTGC GCCCGTCACC GGTGCCGACG CACCGGCTGC CGCCGGTGCG CTGGCCGCGC CCGGTGACGC GACGCTGCGC ACGTTGGCCA CGAACCGCCA GTCGCCGTAG
|
Protein sequence | MHKPVRAWSL QHGLQWRVLG AVLVLWLGVA SYAWYNLSQQ VDDLLDGHLA QGMALLMALQ VQDHEFDEML GVDHITTPDH APPGAPPSWS GSTDAELALH RYATKAVFQV WYQGQLLLRS SDAPNEPLAE LKPGFSDTVV KGVAWRVYTA PAIRPDSYVI MGESREARVE IMSSILRDTW VPMLAGLPLV ALAIWLAVRQ GLVPVVRLGS QVSARKPDAL DPIAIEDSPR ELAPLIAALN QLFIRMESSL ESERRFTSDA AHELRTPIAG IRAQAQAALE VSDDAQRRQA LHGTLAGCDH AAHLVDQLLQ LARLEGARAP NTPSKVSDVL VVAREEVVEL ASKAFESGHE LVLETGDLPG SWLMAADPVL VSALLRNLID NALRYSPPMS TVQVTFEAVD AQGRLWVSVE DSGPGLSPPL LQRLGERFFR ARLNDASGSG LGWSIVRRIA AALDLVVQVD RSPTLGGLRV RIGWMPASAP ARPQGCAPVT GADAPAAAGA LAAPGDATLR TLATNRQSP
|
| |