| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2620 |
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| Symbol | |
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| ID | 6162992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2871835 |
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| End bp | 2872314 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665396 |
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| Product | putative general secretion pathway GspG related transmembrane protein |
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| Protein accession | YP_001791650 |
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| Protein GI | 171059301 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG GCGCTCGCAG ATCGGGTTTC ACCCTGATCG AACTGGTCGT CACGCTGGCC
CTGCTCGGCG TGCTGGCCAT GCTGGCGGCG CCGATGGCCG AACTGGCGGT GCAGCGCAGC
CGCGAGCAGG AGCTGCGGTT GGCGCTGCGC GACATCCGCA ACGCGCTGGA CCGCTACAAG
CGCGCCGCCG ACACCGGCCA GATCACCCGC CAGCCGGGCG ACTCGGGCTA CCCGCCCGAT
CTCGAGGTAC TGGAATCCGG CGTCGACCTG ATCGGCAGCG GCGAACGCAA GCGCCTCTAC
CTGCTGCGCC GCCTGCCGCG CGATCCGCTG GCCGACCCCA ACCTGCCGGC CGCGCGCACC
TGGGGGCTGC GCAGCTACAG CAGCCCGCCG GACGATCCAC GTTCGGGCGA GGATGTCTTC
GATGTCTATT CCAAGGACCC GGGCACCGGG CTGAACGGCG TGCCGTACCG ACAATGGTGA
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| Protein sequence | MRRGARRSGF TLIELVVTLA LLGVLAMLAA PMAELAVQRS REQELRLALR DIRNALDRYK
RAADTGQITR QPGDSGYPPD LEVLESGVDL IGSGERKRLY LLRRLPRDPL ADPNLPAART
WGLRSYSSPP DDPRSGEDVF DVYSKDPGTG LNGVPYRQW
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