Gene Lcho_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2598 
Symbol 
ID6163511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2844702 
End bp2845097 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content73% 
IMG OID641665374 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001791628 
Protein GI171059279 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.159371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCA TCCTTCTTTT CGCCCACGGC GCCCGTGACC CGGCCTGGGC GCGGCCCTTC 
GAAGCCATCG CCGCGCAGAT GCGCGCCGCC GCGCCGGGCA CGCCGGTGGC GCTGGGTTTC
CTCGAACTGA TGCAGCCCGA CTTCGGCGTC GCCAGCAGCG CCCTGATCGA GGCCGGCTGC
ACGCAACTGC AGGTGGTGCC GCTGTTCCTC GGCGCCGGCG GCCATGTGCG CCGTGACCTG
CCGCTGCTGA TCGAGCAGGC GCAGGCTCGC CATCCGGGCG TGGTGATCGC CGCGACGCCG
GCCATCGGCG AGACCGAGGT CGTGACACGC GCGATCGCGC TGGCCGCGCT CGACCTGGCA
CGCGGCCACG CCTCGACAGC GGGCGCCGGT GCATGA
 
Protein sequence
MQGILLFAHG ARDPAWARPF EAIAAQMRAA APGTPVALGF LELMQPDFGV ASSALIEAGC 
TQLQVVPLFL GAGGHVRRDL PLLIEQAQAR HPGVVIAATP AIGETEVVTR AIALAALDLA
RGHASTAGAG A