Gene Lcho_2585 details

Gene Information

• Locus tag: Lcho_2585
• ID: 6163071
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2825026
• End bp: 2825526
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641665360
• Product: ybaK/ebsC protein
• Protein accession: YP_001791615
• Protein GI: 171059266
• COG category: [S] Function unknown
• COG ID: [COG2606] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00011] ybaK/ebsC protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 0.0115756
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGAAGA AACCCGTGCA TGTCAGCGAG ACGCCGGCCA CGCAGTTCCT GCGGCGCGCC 
GGCATCGCCT TCACCGAACA CCCGTACGAC TATGTCGAGC GCGGCGGCAC GGCCGAATCG 
GCGCGCCAGC TGGGCGTCGA CGAACACGCC GTCGTCAAGA CGCTGGTGAT GCAGGACCAG 
GACGCCAAAC CGCTGATCGT GCTGATGCAC GGCGACCGCC AGGTCAGCAC CAAGAACCTG 
GCGCGCCAGA TCGGCGCCAA GAAGGTCGAG CCCTGCGCGC CCGACGTGGC GCAGCGCCAC 
AGCGGCTATC TGGTCGGCGG CACCAGCCCG TTCGGTTTCC GCAAGGCGGT GCCGGTGTAC 
GTCGAGGCCG GCGTCCTGGC CCTGCCGTGC ATCTACATCA ACGGCGGGCG GCGCGGTTTC 
CTGGTCGGCA TCGCGCCGGC CGTGCTGGTC GACAGCCTGG GCGCGCGGGC TGTCGAGGCG 
ATCGACCCGG CCTCCGCCTG A 

 

Protein sequence

MAKKPVHVSE TPATQFLRRA GIAFTEHPYD YVERGGTAES ARQLGVDEHA VVKTLVMQDQ 
DAKPLIVLMH GDRQVSTKNL ARQIGAKKVE PCAPDVAQRH SGYLVGGTSP FGFRKAVPVY 
VEAGVLALPC IYINGGRRGF LVGIAPAVLV DSLGARAVEA IDPASA