| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2577 |
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| Symbol | |
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| ID | 6162254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2813742 |
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| End bp | 2814899 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665352 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001791607 |
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| Protein GI | 171059258 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00027839 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAAAGC GCGATTACTA CGAAGTTCTG GGTGTGGGCA AAACCGCCTC CGAGGACGAG
ATCAAGAAGG CCTACCGCAA GCTGGCCATG AAGCATCACC CGGATCGAAA CCAGGGTGAT
GGCGCGAAGG CGTCGGAAGA GAAGTTCAAG GAGGCGAAAG AGGCCTACGA GATGCTCTCG
GACGCGCAGA AACGCGCTGC CTACGACCAG TTCGGCCACG CCGGCGTCGA CCCCAATGCG
GGTGGCGCGG GCTTCCGGCC GGGTGCGGGC GGCGAAGGCT ACGGCGGCTT TGCCGAGGCC
TTCGGCGACA TCTTCGGCGA CATCTTCGGC CAGCAGGGCG GTGGCGGACG ACGCGGGGCC
GGCGGCCAGC AGGTCTACCG CGGCGCCGAC CTGTCGTACG CGATGGAGAT CACGCTCGAA
GAGGCTGCGC ACGGCAAGGA AAGCCAGATC CGCATCCCGA CCTGGGAAGA GTGCGACACC
TGCCACGGCA GCGGCGCCAA GCCGGGCACC AGCGCCAAGC CGTGCACCAC CTGCCACGGC
GCCGGCACGG TGCATCTGCG CCAGGGTTTC TTCAGCATCC AGCAGACCTG CCCGCACTGC
CACGGCAGCG GCAAGATCAT CCCCGAGCCC TGCACCAGCT GCAACGGCGC GGGCAAGGTC
AAGAAGCAGA AGACGCTCGA GGTCAAGATC CCGGCCGGCA TCAACGAAGG CCAGCGCATC
GCGCTGCGCG GTCATGGCGA GCCGGGCACG CAAGGCGGGC CGGCGGGCGA CCTGTACGTC
GAGATCCGCA TCAAGCAGCA CGAGATCTTC GAGCGCGACA GCGACGACCT GCACTGCACC
GTGCCGGTGC CGCTGACGAC CGCGGCGCTG GGCGGCGCGA TCGAGGTGCC CACGCTCAGC
GGCTCGGCCG AGATCGAGCT GCCCGAAGGC ACCCAGCACG GCAAGACCTT CCGCCTGCGC
GGCAAGGGCA TCAAGGGCAT CCGCTCCAAC TATCCGGGCG ACCTGTACTG CCACGTGTCG
GTGGAGACGC CGGTCAAGCT CACCGAGCAT CAGCGCAAGC TGCTCAAGGA GCTCGACGAG
TCGTTCCGCA AGGGGGGCGA CAAGCATTCG CCCACCTCGA AGAGCTGGAC CGACCGGGTC
AAGGATCTGT TCAAGTAA
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| Protein sequence | MGKRDYYEVL GVGKTASEDE IKKAYRKLAM KHHPDRNQGD GAKASEEKFK EAKEAYEMLS
DAQKRAAYDQ FGHAGVDPNA GGAGFRPGAG GEGYGGFAEA FGDIFGDIFG QQGGGGRRGA
GGQQVYRGAD LSYAMEITLE EAAHGKESQI RIPTWEECDT CHGSGAKPGT SAKPCTTCHG
AGTVHLRQGF FSIQQTCPHC HGSGKIIPEP CTSCNGAGKV KKQKTLEVKI PAGINEGQRI
ALRGHGEPGT QGGPAGDLYV EIRIKQHEIF ERDSDDLHCT VPVPLTTAAL GGAIEVPTLS
GSAEIELPEG TQHGKTFRLR GKGIKGIRSN YPGDLYCHVS VETPVKLTEH QRKLLKELDE
SFRKGGDKHS PTSKSWTDRV KDLFK
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