Gene Lcho_2576 details

Gene Information

• Locus tag: Lcho_2576
• Symbol: dnaK
• ID: 6162511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 2811673
• End bp: 2813613
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641665351
• Product: molecular chaperone DnaK
• Protein accession: YP_001791606
• Protein GI: 171059257
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.000174764
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGGGCAAGA TCATCGGTAT CGACCTCGGC ACGACCAACA GCTGCGTCGC CGTCATGGAA 
GGCAACACGA CGCGCGTGAT CGAGAACAGC GAGGGTGCGC GCACCACGCC GTCGATCATC 
GCGTACCAGG AAGACGGCGA GATCCTGGTC GGTGCCTCGG CCAAGCGCCA GGCCGTGACC 
AACCCGCGCA ACACGCTGTA CGCGGTCAAG CGCCTGATCG GTCGCAAGTT CACCGAGAAG 
GAAGTGCAGA AGGACATCGA CCTGATGCCC TACAAGATCG CTGCGGCCGA CAACGGCGAC 
GCCTGGGTCG AAGTGCGCGG CAAGCGCATG GCCCCGCCGC AAGTCAGCGC CGAAGTGCTG 
CGCAAGATGA AGAAGACCGC CGAGGACTAT CTCGGCGAGG AAGTGACCGA AGCCGTCATC 
ACGGTGCCGG CCTACTTCAA CGACAGCCAG CGCCAGGCCA CCAAGGACGC CGGCCGCATC 
GCCGGCCTGG ACGTCAAGCG CATCATCAAC GAGCCGACCG CGGCCGCGCT GGCCTTCGGC 
CTGGACAAGC ACGGCAAGGG CGACCGCAAG ATCGCGGTCT ATGACCTGGG CGGCGGCACC 
TTCGACATCT CGATCATCGA GATCGCGGAC GTCGACGGCG AGATGCAGTT CGAGGTGCTG 
TCGACCAACG GCGACACCTT CCTGGGCGGC GAGGACTTCG ACCAGCGCAT CATCGATTTC 
ATCATCGCCG AGTTCAAGAA GGACCAGGGC GTCGACCTGT CGAAGGACGT GCTGGCCCTG 
CAGCGCCTGA AGGAAGCGGC CGAGAAGGCC AAGATCGAGC TGTCCAACAG CGCGCAGACC 
GACATCAACC TGCCGTACAT CACGGCCGAC GCGTCGGGCC CGAAGCACCT CAACATCAAG 
CTGACCCGCG CCAAGCTGGA AAGCCTGGTC GAGGAGCTGA TCGAGCGCAC GATCGCACCG 
TGCCGCACGG CGATGAAGGA CGCCGGCGTG TCGGTCGGCC AGATCGACGA CGTGATCCTG 
GTCGGCGGCA TGAGCCGCAT GCCCAAGGTG CAGGACAAGG TCAAGGATTT CTTCGGCAAG 
GAGCCGCGCA AGGACGTCAA CCCGGATGAA GCGGTGGCCG TCGGTGCCGC GATCCAGGGT 
CAGGTGCTGG GCGGCGAGCG CAAGGACGTG CTGCTGCTCG ACGTCACCCC GCTGTCGCTG 
GGCATCGAGA CGCTCGGCGG CGTGATGACG AAGATGATCA CGAAGAACAC CACCATCCCG 
ACCAAGTTCT CGCAGACCTT CTCGACCGCC GACGACAACC AGCCGGCCGT GACGATCAAG 
GTCTACCAGG GCGAGCGCGA GCTGGCCTCG GGCAACAAGA GCCTGGGCGA GTTCAACCTC 
GAAGGCATCC CGCCGTCGCC GCGCGGCACG CCGCAGATCG AGGTGACCTT CGACATCGAC 
GCCAACGGCA TCCTGCACGT GGGCGCCAAG GACAAGGCCA CCGGCAAGGA AAACAAGATC 
ACGATCAAGG CCAACTCGGG TCTGTCGGAA GACGAGATCC AGAAGATGGT GCGTGACGCC 
GAAGCCAACG CGGCCGAGGA CAAGAAGAAG GTCGAGGTCG TCCAGGCCAA GAACCAGGGC 
GACGCGATGG TGCACTCGGT CAAGAAGTCG CTCACCGAAT ACGGCGACAA GCTCGACGCC 
GGCGAGAAGG AAAAGATCGA AGCCGCGATG AAGGACGTCG AGGAAGCCAT CAAGGGCGAC 
GACAAGGACG ACATCGAGGC CAAGACCAAC ACCCTGATGA CGGCCAGCCA GAAGCTCGGC 
GAGAAGATGT ACGCCGACAT GCAGGCCCAG CAGGCCGCCG GTGCCGCTGC CGGCCCCGCG 
GGCGGCGAGG CACCGAAGTC CGAGAGCAAG GCCGACGACG CGGACGTGGT CGACGCCGAG 
TTCAAGGAAG TCAAGAAGTG A 

 

Protein sequence

MGKIIGIDLG TTNSCVAVME GNTTRVIENS EGARTTPSII AYQEDGEILV GASAKRQAVT 
NPRNTLYAVK RLIGRKFTEK EVQKDIDLMP YKIAAADNGD AWVEVRGKRM APPQVSAEVL 
RKMKKTAEDY LGEEVTEAVI TVPAYFNDSQ RQATKDAGRI AGLDVKRIIN EPTAAALAFG 
LDKHGKGDRK IAVYDLGGGT FDISIIEIAD VDGEMQFEVL STNGDTFLGG EDFDQRIIDF 
IIAEFKKDQG VDLSKDVLAL QRLKEAAEKA KIELSNSAQT DINLPYITAD ASGPKHLNIK 
LTRAKLESLV EELIERTIAP CRTAMKDAGV SVGQIDDVIL VGGMSRMPKV QDKVKDFFGK 
EPRKDVNPDE AVAVGAAIQG QVLGGERKDV LLLDVTPLSL GIETLGGVMT KMITKNTTIP 
TKFSQTFSTA DDNQPAVTIK VYQGERELAS GNKSLGEFNL EGIPPSPRGT PQIEVTFDID 
ANGILHVGAK DKATGKENKI TIKANSGLSE DEIQKMVRDA EANAAEDKKK VEVVQAKNQG 
DAMVHSVKKS LTEYGDKLDA GEKEKIEAAM KDVEEAIKGD DKDDIEAKTN TLMTASQKLG 
EKMYADMQAQ QAAGAAAGPA GGEAPKSESK ADDADVVDAE FKEVKK