Gene Lcho_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2575 
Symbol 
ID6162510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2811002 
End bp2811547 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content67% 
IMG OID641665350 
ProductGrpE protein 
Protein accessionYP_001791605 
Protein GI171059256 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000160939 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGACA CGCCCAAAGC CGACATCCCA TCCGACAACG CCGCCCTGGA AGCCCAGGGT 
ATCGCCTCAG AGCTAATCGA CGACAGCGCC GCGCGCATCG CCGAACTCGA AGCCAAGAAC
GCGGATCTGG CTGATGCCTA CCTGCGCGCC AAGGCCGAAG CCGACAACAT CCGCCGTCGT
GCCGATGACG ACATCGCCAA GTCGCGCAAG TTTGCAGTCG AATCCTTCGC CGAGAGCCTG
CTGCCGGTGA AAGACAGCCT GGAGGCCGCG ATTGTGAGCC ACGCCGCCGG CAAGGGCTCG
CCCGAACAGG TGATCGAGGG CGTGCACGCC ACGCTGCGCC AGCTCGGCCA GGCGCTCGAG
CGCAACAAGG TGCTCGAGGT CAATCCGCCG GCCGGCACCA AGTTCGACCC GCACCAGCAC
CAGGCCATCA GCGTGGTGCC CGCCGAACAA GAGGCCAACA CGGTGGTGGC CGTGCTGCAG
AAGGGCTACC TGATCGCCGA CCGCGTGCTG CGGCCCGCGC TGGTGACCGT CGCCGCCGCC
AAATGA
 
Protein sequence
MPDTPKADIP SDNAALEAQG IASELIDDSA ARIAELEAKN ADLADAYLRA KAEADNIRRR 
ADDDIAKSRK FAVESFAESL LPVKDSLEAA IVSHAAGKGS PEQVIEGVHA TLRQLGQALE
RNKVLEVNPP AGTKFDPHQH QAISVVPAEQ EANTVVAVLQ KGYLIADRVL RPALVTVAAA
K