Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2575 |
Symbol | |
ID | 6162510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2811002 |
End bp | 2811547 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641665350 |
Product | GrpE protein |
Protein accession | YP_001791605 |
Protein GI | 171059256 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000160939 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGACA CGCCCAAAGC CGACATCCCA TCCGACAACG CCGCCCTGGA AGCCCAGGGT ATCGCCTCAG AGCTAATCGA CGACAGCGCC GCGCGCATCG CCGAACTCGA AGCCAAGAAC GCGGATCTGG CTGATGCCTA CCTGCGCGCC AAGGCCGAAG CCGACAACAT CCGCCGTCGT GCCGATGACG ACATCGCCAA GTCGCGCAAG TTTGCAGTCG AATCCTTCGC CGAGAGCCTG CTGCCGGTGA AAGACAGCCT GGAGGCCGCG ATTGTGAGCC ACGCCGCCGG CAAGGGCTCG CCCGAACAGG TGATCGAGGG CGTGCACGCC ACGCTGCGCC AGCTCGGCCA GGCGCTCGAG CGCAACAAGG TGCTCGAGGT CAATCCGCCG GCCGGCACCA AGTTCGACCC GCACCAGCAC CAGGCCATCA GCGTGGTGCC CGCCGAACAA GAGGCCAACA CGGTGGTGGC CGTGCTGCAG AAGGGCTACC TGATCGCCGA CCGCGTGCTG CGGCCCGCGC TGGTGACCGT CGCCGCCGCC AAATGA
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Protein sequence | MPDTPKADIP SDNAALEAQG IASELIDDSA ARIAELEAKN ADLADAYLRA KAEADNIRRR ADDDIAKSRK FAVESFAESL LPVKDSLEAA IVSHAAGKGS PEQVIEGVHA TLRQLGQALE RNKVLEVNPP AGTKFDPHQH QAISVVPAEQ EANTVVAVLQ KGYLIADRVL RPALVTVAAA K
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