| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2567 |
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| Symbol | |
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| ID | 6162986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2802569 |
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| End bp | 2804056 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665342 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791597 |
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| Protein GI | 171059248 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0343225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCT TCAATCAACT GCTGCAGGGC TTCATCACCG CCGGCACGCC GGTCAACCTG
CTGTGGTCGC TGCTGGGCTG CACCATCGGC ACGGCGGTGG GCGTGCTGCC GGGGATCGGT
CCGGCCACCG CGGTGGCGAT GCTGCTGCCG ATCACGCTGC AGGTCGAGGT GACGGCGTCG
ATGATCTTCT TCGCCGGCAT CTACTACGGC GCGATGTACG GCGGCTCGAC CACCTCGATC
CTGCTCAACA CGCCCGGCGA GGCCGGCTCG ATGGTCACGG CCATGGAGGG CAACAAGATG
GCCAAGAGCG GCCGCGCCGG GGCCGCGCTG GCCACCGCCG CGATCGGCTC GTTCGTGGCC
GGCACCATCG CCACGGTGGT GGTCACCTTC GGCGCGCCGG TGATCGCCGA ATACGCGGTC
AGGCTCGGCC CGCCGGAATA TTTCATGCTG ATGGTGCTGG CCTTCTGCAC CGTCAGCGCG
GTGCTCGGCA AGAGCACGCT GCGCGGCCTG ACGGCGCTCT TTATCGGCCT GTCGATGGGG
CTGGTGGGCA TCGACCAGAT CTCCGGCACC GCGCGCTACA CGCTGGGCGT GCCCGAGATG
ATGGACGGCA TCGACGTGGT GCTGGTCGCG GTCGGCCTGT TCGCCGTCGC CGAGGCGCTG
CACGTGGTGC TGTTCGAGGG CCGGGTGGTC GAGTCGCAGA ACAAGCTCAG CCGCGTCCAC
ATGAGCCTGT CGGACTGGAA GCGCTCGTTC CCGGCCTGGA TCCGCGCCAC CTTCATCGGC
CTGCCGTTCG GCTGCATCCC GGCCGGTGGC AGCGAGATCC CGACCTTCCT GAGCTACGCG
ACCGAGAAGA AGCTGTCCAA GCATCAGAAG GAGTTCGGCA CCACCGGCGC GATCGAGGGC
GTGGCTGGCC CCGAGGCGGC CAACAACGCG GCCATCACGG CCACGCTGAT CCCGCTGCTG
ACGCTGGGCA TCCCGACCTC CAACACCACC GCGATCCTGC TCGGCGCGTT CCAGAACTAC
GGCATCCAGC CCGGGCCCCA GCTGTTCGAC AGCAACGGCG CGCTGGTCTG GGCGCTGATC
GCCTCGCTCT ACATCGGCAA CGTGATGCTG CTGATCCTCA ACCTGCCGCT GGTGGGGCTG
TGGGTCAAGC TGCTGAAGAT CCCCAAGCCG GGCCTGTATG CCGGCATCCT GATCTTCGCC
ACCGTGGGTG TCTACGGCAT CCGGCAGTCG AGCTTCGACC TGTTCCTGCT CTACGCCATC
GGCCTGCTCG GCCTGGTGAT GCGGCGCTTC GACTTCCCCG CAGCACCGGT GGTGGTCGGC
CTGATCCTCG GCCCGCTCGC CGAAGCGCAG CTGCGCAACG CGATGTCGAT CGGCGAGGGC
AAGTGGAGCG TCTTCCTCGA CCGGCCGATG TCGCTGACGC TGGTGATCGT GGTGATCGCC
GTGCTGGTCC TGCCGCGACT GGTCAAGCTG GTGCAACGCA TGCGCTGA
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| Protein sequence | MDTFNQLLQG FITAGTPVNL LWSLLGCTIG TAVGVLPGIG PATAVAMLLP ITLQVEVTAS
MIFFAGIYYG AMYGGSTTSI LLNTPGEAGS MVTAMEGNKM AKSGRAGAAL ATAAIGSFVA
GTIATVVVTF GAPVIAEYAV RLGPPEYFML MVLAFCTVSA VLGKSTLRGL TALFIGLSMG
LVGIDQISGT ARYTLGVPEM MDGIDVVLVA VGLFAVAEAL HVVLFEGRVV ESQNKLSRVH
MSLSDWKRSF PAWIRATFIG LPFGCIPAGG SEIPTFLSYA TEKKLSKHQK EFGTTGAIEG
VAGPEAANNA AITATLIPLL TLGIPTSNTT AILLGAFQNY GIQPGPQLFD SNGALVWALI
ASLYIGNVML LILNLPLVGL WVKLLKIPKP GLYAGILIFA TVGVYGIRQS SFDLFLLYAI
GLLGLVMRRF DFPAAPVVVG LILGPLAEAQ LRNAMSIGEG KWSVFLDRPM SLTLVIVVIA
VLVLPRLVKL VQRMR
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