| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2559 |
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| Symbol | |
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| ID | 6163159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2791420 |
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| End bp | 2792178 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665334 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001791589 |
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| Protein GI | 171059240 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00360013 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACATCG CAGGCAAGGT TTTCATCGTC ACCGGCGCAG CCTCCGGGCT GGGCGAAGGC
ACGGCGCGCA TGCTCGCCCG CGAAGGCGCA ACCGTGGTGC TGGCCGATCT GCAGGTCGAG
CGCGGCCAGC AGGTCGCCGC CGAGATCGGC GGCGCCTTCG TGCGCTGTGA CGTCTCGAAC
GAGGACGACG GCCGCGCCGT GGTCGCGCAG GCGGTCGCGC TCGGCAAGCT GATGGGGTTG
GTGAATTGCG CCGGCATCGC ACCTGCGATC AAGACCGTCG GCAAGGACGG CGCCCACCCG
CTGGCGGCCT TCAGCAAGAC CATCACCGTC AACCTGATCG GCAGCTTCAA CATGATCCGC
CTGGCCGCCG AGGCGATGTG CAAGAACGAG CCCGAGTCCA CCGGCGAGCG CGGCGTGCTG
ATCAACACCG CCAGCGTGGC GGCCTACGAC GGCCAGATCG GCCAGGCGGC CTACGCCGCC
AGCAAGGGCG GCGTGGTCGG CATGACGCTG CCGATCGCGC GCGACCTGGC GCGCAACGGC
ATCCGCTGCA TGACGATCGC GCCGGGCATC TTCGGCACGC CGATGCTGTT CGGCATGCCG
CAGGAGGTGC AGGACGCGCT GGCCGCCGGC GTGCCCTTCC CGAGCCGGCT CGGCACGCCC
ACCGACTACG CCAAGCTGGT GCATCAGATC GTCACCAACG AGATGCTCAA CGGCGAGGTG
ATCCGCCTGG ACGGCGCGAT CCGCCTGGCA CCGCGCTGA
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| Protein sequence | MDIAGKVFIV TGAASGLGEG TARMLAREGA TVVLADLQVE RGQQVAAEIG GAFVRCDVSN
EDDGRAVVAQ AVALGKLMGL VNCAGIAPAI KTVGKDGAHP LAAFSKTITV NLIGSFNMIR
LAAEAMCKNE PESTGERGVL INTASVAAYD GQIGQAAYAA SKGGVVGMTL PIARDLARNG
IRCMTIAPGI FGTPMLFGMP QEVQDALAAG VPFPSRLGTP TDYAKLVHQI VTNEMLNGEV
IRLDGAIRLA PR
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