| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2552 |
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| Symbol | |
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| ID | 6163537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2785561 |
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| End bp | 2786859 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665327 |
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| Product | exodeoxyribonuclease VII, large subunit |
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| Protein accession | YP_001791582 |
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| Protein GI | 171059233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00277248 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTTGC CTGAGAACCG CGCCCAGCCG ATGGTCTGGG ACGTGGCCGC GCTGGTGCAG
GCCGTCGGCG ATGCGCTGCA GGCGCGCTTC GGCGCGGTGG CGGTGCGCGG CGAGCTCGCC
GGCGTGACCC GCGCGGCCAG CGGGCACTGC TACTTCAACC TGCGGTCGGT CGACGGCAGC
GCCGGCCTGC GCTGCGCGAT GTTCCGCCGC GCCGCCTCGA TGCTCGACTT CACGCCGCGT
GACGGCCAGC AGGTCGAGCT GCGCGGCCGG CTGGCGGTCT ACGAGCCGCG CGGCGAGCTG
CAGCTGATCG TCGAGGCCAT GCGCCCGGCC GGTGCCGGCG CGCTGATGGA GCAGTTCCTG
CGGCTCAAGG CCCGGCTCGA AGGCGAGGGT CTGTTCGAGC CGTCGCGCAA GCGCCCGATC
GAGCCGTATC CGGCGGCCAT CGGCGTCGTC ACCTCGCTCG CCGCGGCGGC TTTGCGCGAC
GTGGCCAGCG CGCTGCAACG GCGTGCGCCG CAGGTCCGGC TGGTGATCTA TCCGGCGAGC
GTGCAGGGCG CGGACGCGCC GGCGCAGCTG GTCGAGGCGA TCCGTCTGGC CGGCCAGCGC
GCCGAGGTGC AGACGCTGCT GGTCTGCCGC GGCGGCGGCT CGCTCGAAGA CCTCTGGGCC
TTCAACGACG AGCAGGTGGT GCGTGCGATC GCGGCATCGC CGCTGCCGGT GATCTGCGGC
GTCGGCCACG AAACCGACTT CACGCTGGCC GATTTCGCCG CCGACCTGCG CGCCCCCACG
CCGACCGCCG CCGCCGAGCT GGCGGCGCCG GCACGCGCCG ACTGCCTGCA GGCGCTCGCC
CAGCAGGCGC GCTGGCTGAG TCAGCGGGTG CACCACCGGC TTGACCGCGA CGCCCAGCGC
CTGGACCGCA TCGCCCAGCG CCTGGCGCGC CCGGCCGACG CATTGCGCGG CCATCTGCAG
CGGCTGGCGC TGCTCGAACA ACGCCACGCC CGCGCCGCAC CGGTCTGGCT GCAGGGCCAG
CAGCACCGGC TCGAACGGCT GCAGTCCCGC TTGCAGGACG CTGGCGCACG GGCGCTGCAG
TCGCGCGAGC AGACGCTGGC GGTGCTGGCT GCCCGGCACG CCGCACTCGA CCCGGGCCAG
GTGCTGCGGC GCGGCTACGC CTGGCTCAAC GACGCGAGCG GCCAGCCGGT GACGAGCGTG
CGCGCGCTGC AGCCCGGCCA GCGCCTGAGC GCGGTGCTGC AGGACGGCCG CGTCGACAGC
GTCGTCGAGG CCGTTCTGCC CGCCATGGCC AGGCGCTGA
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| Protein sequence | MALPENRAQP MVWDVAALVQ AVGDALQARF GAVAVRGELA GVTRAASGHC YFNLRSVDGS
AGLRCAMFRR AASMLDFTPR DGQQVELRGR LAVYEPRGEL QLIVEAMRPA GAGALMEQFL
RLKARLEGEG LFEPSRKRPI EPYPAAIGVV TSLAAAALRD VASALQRRAP QVRLVIYPAS
VQGADAPAQL VEAIRLAGQR AEVQTLLVCR GGGSLEDLWA FNDEQVVRAI AASPLPVICG
VGHETDFTLA DFAADLRAPT PTAAAELAAP ARADCLQALA QQARWLSQRV HHRLDRDAQR
LDRIAQRLAR PADALRGHLQ RLALLEQRHA RAAPVWLQGQ QHRLERLQSR LQDAGARALQ
SREQTLAVLA ARHAALDPGQ VLRRGYAWLN DASGQPVTSV RALQPGQRLS AVLQDGRVDS
VVEAVLPAMA RR
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