| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2546 |
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| Symbol | |
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| ID | 6162168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2776835 |
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| End bp | 2779978 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665321 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001791576 |
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| Protein GI | 171059227 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0226103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTC ACAGCCACGA CAACGCCCGC CGTTCGGGCT TCAACATCTC GCGCTGGGCG
CTCGAGCACC CGGCGCTGAC GCGCTACCTG CTGATCGTGC TGACGCTGCT GGGCATCGTC
GCCTACTTCC AGCTCGGCCA GGATGAGGAC CCGCCGTTCA CCTTCCGGGC GATGGTGGTG
CAGGCGCGCT GGCCGGGCGC GACCGCGCAG CAGATGGCCG AGCAGGTGAC CGACAAGATC
GAGAAGGTGC TGCAGGAGGC GCCGTACCCG GACATCATCC GCAGCTACAC CAAGCCGGGC
GAGTCGGTCA CGATCATCCA GATCAAGGAC AACTCGCCGC CGGCCGAGGT CGAGCAGGTC
TGGTACCAGG TGCGCAAGAA GATCGGCGAC ATGCGCTCAA GCCTGCCGCA GGGCGTGATC
GGGCCGTTCT TCAACGACGA GTTCGGCGAC GTGTTCGGCA CCATCTATGC GCTGTCGGCC
GATGGTTTTT CGGCCGAGGA GCTGCGCGAG TTCTCCGACC GGGTGCGCTC GCAGTTGCTG
CAGGTGCCGT CGGTGGCCAA GGTGGCGGTG TTCGGCGCGC AGAGCGAGAA GATCTTCATC
GAGATCCCCG GCAAGCGGCT GGCGCAGCTG GGCCTGGACC TGAACCAGGT GATCGCGCAG
ATCGGCGCGC AGAACGCGGT GGAGGGCGCC GGCCAGCTCA ACGCCGGCAG CCAGAACCTG
CAGTTGCGGG TGGGCGGCCA GTTCAACTCG GTGGAAGAGC TCGCGCGCAT GCCGCTGCGC
GCGGTCAACC CCGCCACCGG CGCGGCCAGC AACCTGAAGC TCGGTGACAT CGCCACGCTG
CGCCGCGGTT ATGCCGATCC GCCCGAGGTC AAGGTGCGCC ACCAGGGCCG CGAGGTCATC
GCGCTGGGCA TCTCGATGGC CAAGGGCGGC GACATCATCG CGCTGGGCAA GGAGCTGCGC
GCGCGTGCCG ATCTGATCCG CGCCGAGCTG CCGGCCGGCA TCGAGCTGAG CCAGATCCAG
AACCAGCCCG ACGCCGTGTC GCGTTCGGTG GGCGAGTTCG TCAAGGTGCT GATCGAGGCG
GTGGCGGTGG TGCTGGCGGT GAGCTTCATC AGCCTGGGGC TGCACACCAA ACCGCTGCGC
ATCGACATCT GGCCCGGCAT GGTGGTGGGC ATCACGATTC CGGTGGTGCT GTCGATCACC
TTCGTCACGA TGTACTACTG GGGCGTCGGG CTGCACAAGA TCTCGCTGGG CTCGCTGATC
ATCGCGCTCG GGCTGCTGGT CGACGACGCC ATCATCGCGG TCGAGATGAT GGTGCGCAAA
CTCGAAGAGG GCCACGACAA GCTCTACGCC GCCACCTACG CCTACGACTC GACCGCGATG
CCGATGCTCA CCGGCACGCT GATCACCGCC GCGGGTTTCC TGCCGATCGG CCTGGCGCAG
TCGACGGTGG GCGAGTACAC CTTCGCGATC TTTGCCGTGA CGTCGGCGGC GCTGCTGATC
TCGTGGGTGG TGTCGGTGTA TTTCGTGCCG TACCTGGGCG CGCGTTTCCT GCGGGTCAAG
CCGCACGCCG ACGCCGGCGA GTTGCACGAC CTGTTCGACA CGCCGTTCTA CAACCGCTTC
CGGCGCCTGG TCGGCTGGTG CGTGCAGCAC CGCTGGATCA CGATCGGGCT GACGATCGGC
GTCTTCGTGC TCGGCCTGGC CGGCATGGGC CGGGTCCAGC AGCAGTTCTT CCCGGATTCG
AGCCGGCACG AGATCCTGGT CGACCTGTGG CTGCCCGAAG GCTCGACGAT CGAGGAGAGC
GACGCGCTGG CGCAGCGCTT CGGCGCACGT TTGCAGCAGG AGGCCGGGGT CGAGAGTGTC
ACGACCTGGG TCGGCACCGG CGTGCCGCGG TTCTATCTGC CGCTGGACCA GATCTTTCCG
CAGAGCAACG TCAGCCAGTC GATCGTGCTG CCGAAAAACC TGGCCGAGCG CGAGGCCTTG
CGCAAGCGCC TGCCGGCGCT GCTGGCGAGC GAGTTCCCGG AGGTGCGCGG GCGCGTCAAG
CTGCTGCCCA ACGGGCCGCC GGTGCCGTAT CCGGTGCAGT TCCGGGTGGT CGGACCGGAG
GTCGCGCAGG TGCGCCACTG GGCCGATCAG GCCAAGGAGA TCCTGCGCAC CAACCCGAGC
ATGCGCGGTG TCAACGACAA CTGGAACGAG TCGATCAAGG CGCTGCGCCT GGACATCGAC
CAGGCCAAGG CGCGTGCGCT GGGCATCACC AGCCAGTCGC TCGCGCAGGC CACGCGCACG
CTGCTCAACG GCACGACCAT CGGCCAGTAC CGCGAGGGCG ACAAGCTGGT CGACGTGGTG
CTGCGCCAGC CGCCGGACGA GCGTGCGGCG ATCACCGATC TGGCGTCGGC CTACGTGCCC
ACCGGCAGCG GCCGCGCGGT GCCGCTGACG CAGATCGCCC AGATCGGCTA CCAGTGGGAG
CCGGGCGTGA TCTGGCGCGA GGGCCGCCAG TACGCCGTGA CCGTGCAGGG CGACGTGGCC
GAGGGTGTGC AGGGGCCGAC CGTGACCGAG CAGCTCTGGC CCGAAATGCA AAAACTGCGC
GAACGCATGC CGCCGGGTTA TTCGATCCAG ATCGCCGGCG CGGTCGAGGA GAGCGCCAAG
GGCCAGGGCT CGATCGCCGC GGGCGTGCCG ATCATGCTTT TCATCATCTT CACGCTGCTG
ATGCTGCAGT TGCAGAGCTT CTCGCGCTCG TTGCTGGTGT TCCTGACCGG CCCGATGGGC
ATCGCCGGCG TGGCCGCGGC GCTGCTGCTG CTGAACCGGC CGTTCGGCTT CGTGGCGCTG
CTGGGCGTGA TCGCGCTGAT GGGCATGATC ATGCGCAACT CGGTGATCCT GATCGACCAG
ATCGAGACCG ACCGCAACCG TGGCGTGCCG ACCTGGGACG CGGTGGTGGA GTCGGCGGTG
CGGCGTTTCC GGCCGATCGT GCTGACGGCG GCGGCGGCGG TGCTGGCGAT GATCCCGCTG
TCGCGCAGCG TGTTCTGGGG GCCGATGGCG GTGGCCATCA TGGGCGGGCT GATCGTCGCC
ACGGCGCTCA CGCTGCTGGC GCTGCCGGCG ATGTATGCGG CATGGTTTCG GGTCCGTCGC
GAACACCCTG TCGCAGCCGG CTAG
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| Protein sequence | MKVHSHDNAR RSGFNISRWA LEHPALTRYL LIVLTLLGIV AYFQLGQDED PPFTFRAMVV
QARWPGATAQ QMAEQVTDKI EKVLQEAPYP DIIRSYTKPG ESVTIIQIKD NSPPAEVEQV
WYQVRKKIGD MRSSLPQGVI GPFFNDEFGD VFGTIYALSA DGFSAEELRE FSDRVRSQLL
QVPSVAKVAV FGAQSEKIFI EIPGKRLAQL GLDLNQVIAQ IGAQNAVEGA GQLNAGSQNL
QLRVGGQFNS VEELARMPLR AVNPATGAAS NLKLGDIATL RRGYADPPEV KVRHQGREVI
ALGISMAKGG DIIALGKELR ARADLIRAEL PAGIELSQIQ NQPDAVSRSV GEFVKVLIEA
VAVVLAVSFI SLGLHTKPLR IDIWPGMVVG ITIPVVLSIT FVTMYYWGVG LHKISLGSLI
IALGLLVDDA IIAVEMMVRK LEEGHDKLYA ATYAYDSTAM PMLTGTLITA AGFLPIGLAQ
STVGEYTFAI FAVTSAALLI SWVVSVYFVP YLGARFLRVK PHADAGELHD LFDTPFYNRF
RRLVGWCVQH RWITIGLTIG VFVLGLAGMG RVQQQFFPDS SRHEILVDLW LPEGSTIEES
DALAQRFGAR LQQEAGVESV TTWVGTGVPR FYLPLDQIFP QSNVSQSIVL PKNLAEREAL
RKRLPALLAS EFPEVRGRVK LLPNGPPVPY PVQFRVVGPE VAQVRHWADQ AKEILRTNPS
MRGVNDNWNE SIKALRLDID QAKARALGIT SQSLAQATRT LLNGTTIGQY REGDKLVDVV
LRQPPDERAA ITDLASAYVP TGSGRAVPLT QIAQIGYQWE PGVIWREGRQ YAVTVQGDVA
EGVQGPTVTE QLWPEMQKLR ERMPPGYSIQ IAGAVEESAK GQGSIAAGVP IMLFIIFTLL
MLQLQSFSRS LLVFLTGPMG IAGVAAALLL LNRPFGFVAL LGVIALMGMI MRNSVILIDQ
IETDRNRGVP TWDAVVESAV RRFRPIVLTA AAAVLAMIPL SRSVFWGPMA VAIMGGLIVA
TALTLLALPA MYAAWFRVRR EHPVAAG
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