| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2543 |
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| Symbol | clpX |
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| ID | 6162504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2773167 |
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| End bp | 2774441 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641665317 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001791573 |
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| Protein GI | 171059224 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00526327 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGAGA AAAAAGGCTC CTCCGGCGAA AAGATCTTGT ACTGCTCGTT CTGCGGAAAG
AGCCAGCACG AGGTCAAGAA GCTGATCGCC GGCCCGTCGG TGTTCATCTG TGATGAATGC
ATCGAGTTGT GCAACGACAT CATCCGCGAC GAAGTGCCCG CGGTGGAGGC GGGTGGCAAG
ACCAGCCGCA GCGATCTGCC GGTGCCCAGC GAGATCAAGA CACTGCTCGA TCAGTACGTG
ATCGGTCAGG ACGCTGCCAA GCGCACGCTG TCAGTGGCGG TCTACAACCA CTACAAGCGC
CTCAAGCACA TGGCCGACAA GGGCAAGGGC GAAGAGGTCG AGCTGGCCAA GAGCAACATC
CTGCTGATCG GGCCCACCGG CTCGGGCAAG ACGCTGCTGG CGCAGACGCT CGCGCGCATG
CTCAACGTGC CGTTCGTGAT TGCCGACGCC ACCACGCTGA CCGAAGCCGG TTACGTGGGC
GAAGACGTCG AGAACATCAT CCAGAAGCTG CTGCAGAACT GCAACTACGA GGTCGAGCGG
GCCCAGCGCG GCATCGTCTA CATCGACGAG ATCGACAAGA TCAGCCGCAA GGCCGACAAC
CCGTCGATCA CGCGCGATGT CTCCGGCGAG GGCGTGCAGC AGGCGCTGCT CAAGCTGGTC
GAAGGCACGA TGGCCAGCGT GCCGCCGCAG GGCGGGCGCA AGCATCCGAA CCAGGACTTC
CTGCAGATCG ACACGACCAA CATCCTGTTC ATCTGCGGCG GCGCGTTCGA CGGCCTGGAA
AAGGTCATCG CCAACCGCTC CGAGAAATCG GGCATCGGTT TCGGAGCGAC GGTCAAGAGC
AAGGCCGAGC GCAGCGTCTC CGAAGTGTTC CGCCAGATCG AGCCCGAAGA CCTGATCAAG
TTCGGCATCA TCCCTGAACT GGTCGGGCGT CTGCCCGTCA TCGCCACCCT TGGCGAGCTG
ACCGAAGACG CGCTCGTGCA GATCCTGACC GAGCCGAAGA ACGCGCTGCT CAAGCAGTAT
CAGCGACTGT TCGGCATGGA CGGCGTCGAG CTCGAGATCC GGCCGTCCGG CCTGGCCGCG
ATCGCCCAGA AGGCGCTCAA GCGCAAGACC GGTGCGCGTG GCTTGCGCTC GATCGTCGAG
CAGGCCTTGA TGGACACCAT GTTCGAGTTG CCCGCCATGG ACGGCGTGGC CAAGGTGGTG
GTGGACGAAA ACACCATCGA AGACAACACC ATGCCCCTGC TCGTCTACCG CGAGCAGGCC
AAGGCCAGCG CCTGA
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| Protein sequence | MPEKKGSSGE KILYCSFCGK SQHEVKKLIA GPSVFICDEC IELCNDIIRD EVPAVEAGGK
TSRSDLPVPS EIKTLLDQYV IGQDAAKRTL SVAVYNHYKR LKHMADKGKG EEVELAKSNI
LLIGPTGSGK TLLAQTLARM LNVPFVIADA TTLTEAGYVG EDVENIIQKL LQNCNYEVER
AQRGIVYIDE IDKISRKADN PSITRDVSGE GVQQALLKLV EGTMASVPPQ GGRKHPNQDF
LQIDTTNILF ICGGAFDGLE KVIANRSEKS GIGFGATVKS KAERSVSEVF RQIEPEDLIK
FGIIPELVGR LPVIATLGEL TEDALVQILT EPKNALLKQY QRLFGMDGVE LEIRPSGLAA
IAQKALKRKT GARGLRSIVE QALMDTMFEL PAMDGVAKVV VDENTIEDNT MPLLVYREQA
KASA
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