| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2541 |
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| Symbol | |
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| ID | 6162551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2769149 |
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| End bp | 2769967 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641665311 |
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| Product | glutamate racemase |
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| Protein accession | YP_001791571 |
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| Protein GI | 171059222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00114878 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCACCT CACCTCTGCA GCATCGCGTG CGCATCGGGG TTTTCGACTC AGGACTTGGC
GGGCTCTCGG TGTTGCGCGC AATCCACGAG TTGCTGCCCT CGGCCACGCT GATGTACGTC
GCCGACTCGG GACATGCACC CTATGGCGAG CGGTCTGTGG CCTACGTCGA AGAACGATCT
CTGCGCATTG CGGCATTCCT GCGGGATCAA GGCGCACAGG TACTGGTCGT GGCCTGCAAC
ACAGCGACGG CCGCGGCGGT GCAGGCACTG CGGATGCACC ATCGTGATTG GGCAATCGTC
GGCGTCGAAC CCGGCATCAA ACCCGCAGCG GCCATGACGC GAAATGGACG AATCGGCGTC
CTCGCCACCG AAGGCACCTT GCGCAGCGAT CGATTCAAAC TCCTGGCCCA AGCCCACGCG
GCGCATGTCG AACTGTTTCT TCAAGCCTGC CCAGGCTTGG CGGCCGCCAT CGAATCCGGG
GCACTGACAT CACCCGCAGT CACCGAACGC GTGCAGACCT GCTGCGCTCC ACTGCGCGAG
CATCAAGTCG ACACCGTCGT GCTCGGGTGC ACGCACTACC CGTTCGTGGC GAATCAGATC
GCTGCGGCAC TCGGCCCGGA CGTCGTGCTG ATCGACACGG CGGATGCTGT CGCGCGGCGC
ACCCTTGCGT TGAGCTTGGC ACAGGCCGCG CCTGACGATG ATCTCAATCA GGACGATCGA
CCCGTCACCC GCATGTGGAC GACTGGGGAC CGACTTCTGC TGGCCAACGT GGCCGAGCGG
TGGTTGACGT TTCCGTGCAC CGTCGACACC CTGCCGTGA
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| Protein sequence | MPTSPLQHRV RIGVFDSGLG GLSVLRAIHE LLPSATLMYV ADSGHAPYGE RSVAYVEERS
LRIAAFLRDQ GAQVLVVACN TATAAAVQAL RMHHRDWAIV GVEPGIKPAA AMTRNGRIGV
LATEGTLRSD RFKLLAQAHA AHVELFLQAC PGLAAAIESG ALTSPAVTER VQTCCAPLRE
HQVDTVVLGC THYPFVANQI AAALGPDVVL IDTADAVARR TLALSLAQAA PDDDLNQDDR
PVTRMWTTGD RLLLANVAER WLTFPCTVDT LP
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