| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2537 |
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| Symbol | |
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| ID | 6163168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2764414 |
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| End bp | 2765370 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641665307 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001791567 |
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| Protein GI | 171059218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000289542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCCTGC CCGCAGCTCT CGCCAAGGCG CGATTTCCGG TGATCGGCGC GCCGCTGTTC
ATCATCAGCA ACCCCAAGCT GGTGATCGAG CAGTGCAAGG CCGGTGTGAT CGGCGCCATG
CCGGCACTCA ACGCCCGGCC GGCCTCGCAG CTCGACGACT GGCTGGCCGA GATCACCGAG
ACGCTCGCCG CCCACGACGC TGCCCATCCC GAGGCGCCGG CCGCGCCGTT CGCGATCAAC
CAGATCGTGC ACAAGAGCAA CGACCGGCTC GAACACGACC TGGCGCTGTG CGGCAAGTAC
CGGGTGCCGA TCGTCATCAC CAGCCTGGGC GCGCGCAGCG ACGTCAACCA AGCGGTGCAC
GGCTGGGGCG GCGTGGTGAT GCACGACATC ATCAACAACG CCTTCGCGCA CAAGGCGATC
GAGAAGGGCG CCGACGGCCT GATCGCGGTG GCGGCCGGTG CGGGCGGGCA CGCGGGGGTC
AAGAGCCCGT TCGCGCTGAT CCAGGAAATC CGCCAGTGGT TCGACGGCCC GCTGGCGCTG
TCGGGCTCGA TCGCCAGTGG CGGTGCGGTG CTGGCGGCGC AGGCGATGGG GGCGGATTTC
GCCTACATCG GCTCGGCCTT CATCGCCACC CATGAAGCGC GTGCCAGCGA CGACTACAAG
CAGTGCATCG TCGACAGCGA CAGCGACGAC ATCGTCTACA GCAACCTCTT CACCGGCGTG
CACGGCAACT ACCTGAAGGC CTCGATCCGA GCCTCCGGGC TGGACCCCGA GAACCTGCCC
GAGAGCGACC CCAGCAAGAT GAACTTCGGC GGCGACACCG CCAAGAAGGC CTGGAAGGAC
ATCTGGGGCT GCGGCCAGGG CATCGGCGCG ATCGAGCAGA TCGTCGGCGC GGCCGAGCTG
GTGGCGCGCT GGCAGCGCGA ATACCAGGCG GCCCGTGCGC GCCTGTGCGT GGCCTGA
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| Protein sequence | MALPAALAKA RFPVIGAPLF IISNPKLVIE QCKAGVIGAM PALNARPASQ LDDWLAEITE
TLAAHDAAHP EAPAAPFAIN QIVHKSNDRL EHDLALCGKY RVPIVITSLG ARSDVNQAVH
GWGGVVMHDI INNAFAHKAI EKGADGLIAV AAGAGGHAGV KSPFALIQEI RQWFDGPLAL
SGSIASGGAV LAAQAMGADF AYIGSAFIAT HEARASDDYK QCIVDSDSDD IVYSNLFTGV
HGNYLKASIR ASGLDPENLP ESDPSKMNFG GDTAKKAWKD IWGCGQGIGA IEQIVGAAEL
VARWQREYQA ARARLCVA
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