| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2528 |
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| Symbol | |
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| ID | 6163983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2757873 |
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| End bp | 2759300 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665298 |
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| Product | histidine kinase |
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| Protein accession | YP_001791558 |
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| Protein GI | 171059209 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00877701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGAGC GCGATCCCGT CAGCCAGCCG CCGCGTCTGC AGCGGCTGGG CGTGCGGCTG
ATGCTGCTGT TCCTGCTGCT CGCGCTGGTC ATGACCCTCA CGTTCATGAC CGGCATGCAG
CGTGCGCTCG GTGGCGGATG GCGTGCGCTG GTGCGCCCGC TGGTGGCCGA TTACGTCGAC
CGCCTGGTCG CCGACATCGG CAGCCCGCCC GACGAGGCGC GCGCCCAGGC GCTTGTCGAT
CGGCTGCCGG TGGCCGTGCG CATCGAAGGC CCGCAGGTCA ACTGGTCGTC GCACCCCGAC
GGCCTGCCAC GCCAGCCCTT GCCGCTGCGC CCGATGCATC GCCCGCCGTG GTTGCGCGGC
GAGGGTGATG CGGTGGGGCG GCCGATGCAT CCGAGGATGC GCTCCGATGA CGACGCCGCC
GAGGCCCCGT CGGGCGAGCG TGGTTCGTTC ACGCTGACAC GTCGCAGTGC CGACGGCCAC
CGCATCGTCT TTGCCCTCGG CGAGGTGCCG TTGCGTCATC AGCCGCGGGT GATCGGCTGG
ATCACGCTGG CGCTGCTGCT GCTGGTCACC GCGCTGGCCT ATGCCGTGAT GCGCCACCTG
TTGCGTCCGC TGGCCGAGAT CCGCGCCGGT GCCGTGCGCT ACGGCCGCGG CGATTTCGAC
GAGCCGATCA TCGTGCGTCG CGGCGACGAG CTCGGCCAGC TCGCCGGCCA GATCAACACC
ATGGCCGGCG AACTGCGCCA CATGCTCGAC GCCAAGCGCG CCCTGCTGCT GGCCATCAGC
CACGAGCTGC GCTCACCGCT GACACGCGCG CGCCTGAACG CCGAACTGGT CGACGAAGGC
AGCGCCCGCG ATGCGCTGCT GCGCGACCTG GGCGAGATGC GCGAGCTGAT CAACGATCTG
CTCGAGAGCG AACGCCTGGC TGCCGGCCAC CGCGCACTTC AGCCCGAGGC CACCGACCTG
GCCGCGCTGG TGCGTCAGAC CGTGGCCGAT GTGCTGGACA GCCGCGGGGT TCGTGCGGGC
GAATCCGCGC CACGGGTCGA GCTGCAGCTC GACGATCAGC TGGGGATGAG CCGCGTCGAC
CCGGCACGCT GGCGCCTGCT GGTGCGCAAC CTGATCGACA ACGCCCTGCG TCACGGCCGG
CTGGCGCCGG CGCCGGCCGA GGTGATCGTG CGCCTGCAAG CCGACGGCGA TCAGCTGCTG
CTGAGCGTGC GCGACCACGG CCCCGGCGTC GATGCCGAAC ACCTGGCGCA CCTGAGCGAG
CCGTTCTACC GCGCCGATGC CGCCCGGGCC CGCCACACCG GCGGCGTCGG GCTGGGCCTG
CATCTGTGCC GGCTGGTGGC GCAGGCGCAC GGCGGCACGC TGACGCTGCG CCCGGCGCAA
CCCGGTCTGG AGGTCCAGGT GCATTGGCCC CGATACCTGC CCGCGTGA
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| Protein sequence | MAERDPVSQP PRLQRLGVRL MLLFLLLALV MTLTFMTGMQ RALGGGWRAL VRPLVADYVD
RLVADIGSPP DEARAQALVD RLPVAVRIEG PQVNWSSHPD GLPRQPLPLR PMHRPPWLRG
EGDAVGRPMH PRMRSDDDAA EAPSGERGSF TLTRRSADGH RIVFALGEVP LRHQPRVIGW
ITLALLLLVT ALAYAVMRHL LRPLAEIRAG AVRYGRGDFD EPIIVRRGDE LGQLAGQINT
MAGELRHMLD AKRALLLAIS HELRSPLTRA RLNAELVDEG SARDALLRDL GEMRELINDL
LESERLAAGH RALQPEATDL AALVRQTVAD VLDSRGVRAG ESAPRVELQL DDQLGMSRVD
PARWRLLVRN LIDNALRHGR LAPAPAEVIV RLQADGDQLL LSVRDHGPGV DAEHLAHLSE
PFYRADAARA RHTGGVGLGL HLCRLVAQAH GGTLTLRPAQ PGLEVQVHWP RYLPA
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