Gene Lcho_2519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2519 
Symbol 
ID6161484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2750195 
End bp2751154 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content69% 
IMG OID641665289 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_001791549 
Protein GI171059200 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00724437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCCA CGAGTCCATC ACCGGCCGAT CAGGCCGGAT CGGCCGCAGT CGCCCCCGCC 
ATCGACGCGA CCACTTCGAC CACCACGACC GTGCACGCCC TGGTGCAGGC GATGAGCACG 
CGACTGACGC AGGCCGGCGT CGCCTTCGGC CACGGCACCA CCAATGCCCG CGACGAAGCG 
GCCTGGCTGA CGATGTGGAA GCTCGGCCTG TCGCTCGACG CCTACGACGA AGTGGCCGAT 
TCGCCGGTGT CGCCCGCCAA CGTGGCGGGT GTCGAGGCAG TGATCGCGGA GCGCATCGCC 
AGCCGCAAAC CCGCTGCCTA CCTGACCCAC GAGGCCTGGC TACAGGGCGT GCCGTTCTAT 
GTCGACGAAC GCTGCATCGT GCCGCGCTCG TTCATCGCCG AACTGCTGGG CGACCCGCAG 
TACGGCGACA TGCTCGACGC CTGGCTGAGC GATCAGACCC GGCGCGTGCT CGACCTGTGC 
ACCGGCAACG GCAGCCTGGC CGTGCTGGCC GCGATGGCCT ACCCGGACGT GGTGGTCGAC 
GGCGCCGACC TGTCGCACGA TGCGCTCGAC GTCGCCCGCA TCAACGTCCA GCGCCACCAA 
CTCGGCGAGC GCATCACGCT GCTGCACAGC GACGGCCTCA AGAGCGTGAA CGGGCCCTAC 
GACCTGATCC TGTGCAACCC GCCGTACGTC AACGCCCAGT CGATGGCAGC GCTGCCGCCG 
GAGTTCAAGG CCGAACCCGA GCTGGCGCTG GCCGGTGGCG CCGACGGCAT GGATTTCATC 
CGTGCGCTGC TCGCCGATCT GCCGAAGAAT CTGACCCCGC ACGGCGTGCT GGTGCTCGAG 
ATCGGCCACG AGCGTGCGCA CTTCGAAGCG GCCTTTCCGC GCCTGCCCGC CATCTGGCTG 
GAAACCAGTG CCGGCTCGGA TCAGGTCCTG CTGCTGCCGC GAGACGTGCT CGCGGCCTGA
 
Protein sequence
MNPTSPSPAD QAGSAAVAPA IDATTSTTTT VHALVQAMST RLTQAGVAFG HGTTNARDEA 
AWLTMWKLGL SLDAYDEVAD SPVSPANVAG VEAVIAERIA SRKPAAYLTH EAWLQGVPFY 
VDERCIVPRS FIAELLGDPQ YGDMLDAWLS DQTRRVLDLC TGNGSLAVLA AMAYPDVVVD 
GADLSHDALD VARINVQRHQ LGERITLLHS DGLKSVNGPY DLILCNPPYV NAQSMAALPP 
EFKAEPELAL AGGADGMDFI RALLADLPKN LTPHGVLVLE IGHERAHFEA AFPRLPAIWL 
ETSAGSDQVL LLPRDVLAA